Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10084416	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10490267	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10932063	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1156249	0.92[ASN][1000 genomes]
rs11690070	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12472876	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12616166	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13010221	0.94[ASN][1000 genomes]
rs13024043	0.85[ASN][1000 genomes]
rs1374708	0.94[ASN][1000 genomes]
rs1374709	0.94[ASN][1000 genomes]
rs1447488	0.89[ASN][1000 genomes]
rs1447490	0.89[ASN][1000 genomes]
rs1447493	0.89[ASN][1000 genomes]
rs1447495	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1550909	1.00[JPT][hapmap]
rs17637637	0.89[ASN][1000 genomes]
rs34157021	0.94[ASN][1000 genomes]
rs34368384	1.00[ASN][1000 genomes]
rs35071164	0.87[ASN][1000 genomes]
rs4675457	0.85[ASN][1000 genomes]
rs71427747	0.96[ASN][1000 genomes]
rs921163	1.00[JPT][hapmap]
rs959032	0.89[ASN][1000 genomes]
rs959033	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv964353	chr2:205303005-205473935	Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:205304000-205314200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

Quick Search: