Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:125186984..125189728-chr2:125193373..125195505,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11123045	0.87[YRI][hapmap]
rs11686659	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs11693506	0.90[CHB][hapmap]
rs12053037	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs12618343	0.81[CHB][hapmap]
rs12999580	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs1503998	0.82[YRI][hapmap]
rs1543901	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1816171	0.87[YRI][hapmap]
rs2042657	0.87[YRI][hapmap]
rs2420852	0.92[CEU][hapmap]
rs2420865	1.00[CHB][hapmap];0.84[JPT][hapmap]
rs2420868	0.89[CHB][hapmap]
rs2901270	0.87[YRI][hapmap]
rs2920061	0.87[YRI][hapmap]
rs2968541	0.82[YRI][hapmap]
rs4278930	0.82[YRI][hapmap]
rs4384799	0.87[YRI][hapmap]
rs4848242	0.90[CHB][hapmap]
rs6541952	0.87[YRI][hapmap]
rs6541953	0.87[YRI][hapmap]
rs6706133	0.87[YRI][hapmap]
rs6707283	0.82[YRI][hapmap]
rs6727886	0.92[CEU][hapmap]
rs6731776	0.87[YRI][hapmap]
rs6735412	0.87[YRI][hapmap]
rs6745541	0.89[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014610	chr2:125124983-125350342	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv834355	chr2:125128585-125291043	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv834356	chr2:125141494-125315418	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3350614	chr2:125188282-125190280	Inactive region	Chromatin interactive region	n/a	n/a	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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