Variant report

Variant	rs7624843
Chromosome Location	chr3:94776538-94776539
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs1017370	0.82[EUR][1000 genomes]
rs10212430	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1021932	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10804440	0.82[EUR][1000 genomes]
rs1120672	0.82[EUR][1000 genomes]
rs11706789	0.83[EUR][1000 genomes]
rs11707669	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11710300	0.83[EUR][1000 genomes]
rs11713740	0.84[AMR][1000 genomes]
rs11718955	0.81[EUR][1000 genomes]
rs11720623	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11918258	0.83[EUR][1000 genomes]
rs12634496	0.86[AMR][1000 genomes]
rs1368193	0.83[EUR][1000 genomes]
rs1432473	0.81[EUR][1000 genomes]
rs1529652	0.83[EUR][1000 genomes]
rs1529654	0.83[EUR][1000 genomes]
rs1835872	0.81[EUR][1000 genomes]
rs2116611	0.82[EUR][1000 genomes]
rs300301	0.85[EUR][1000 genomes]
rs300306	0.85[EUR][1000 genomes]
rs4857129	0.82[EUR][1000 genomes]
rs49698	0.85[EUR][1000 genomes]
rs728066	0.87[EUR][1000 genomes]
rs7626749	0.82[EUR][1000 genomes]
rs7627313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7631515	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7634882	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7635097	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9809325	0.83[EUR][1000 genomes]
rs9813195	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9822197	0.81[EUR][1000 genomes]
rs9822600	0.83[EUR][1000 genomes]
rs9827377	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9830733	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9830753	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9830901	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9838383	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9850418	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9861234	0.83[EUR][1000 genomes]
rs9861368	0.91[EUR][1000 genomes]
rs9880324	0.83[EUR][1000 genomes]
rs991552	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877169	chr3:94675697-94840854	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv590993	chr3:94759504-94841342	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv1012191	chr3:94769139-94854973	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv536652	chr3:94769139-94854973	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:94774400-94777200	Weak transcription	Fetal Heart	heart

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