The 2.0 version of rSNPBase

Variant report

Variant rs7626888
Chromosome Location chr3:119800309-119800310
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119760200-119805400 Weak transcription HMEC breast
2 chr3:119764600-119812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:119769200-119804400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:119771400-119809400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr3:119771800-119805400 Weak transcription NHEK skin
6 chr3:119773200-119807600 Weak transcription Right Ventricle heart
7 chr3:119779400-119804200 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr3:119779400-119807400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:119779600-119807800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr3:119780600-119807800 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr3:119788400-119805400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:119788400-119808600 Weak transcription Primary B cells from cord blood blood
13 chr3:119789400-119809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:119789800-119807800 Weak transcription Primary B cells from peripheral blood blood
15 chr3:119790000-119807600 Weak transcription Liver Liver
16 chr3:119790200-119805000 Weak transcription HepG2 liver
17 chr3:119790400-119800600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:119790400-119805200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr3:119790600-119807400 Weak transcription Brain Substantia Nigra brain
20 chr3:119790600-119807800 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr3:119790600-119809200 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr3:119790800-119808000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr3:119790800-119809200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr3:119790800-119809400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr3:119791000-119809600 Weak transcription Fetal Muscle Leg muscle
26 chr3:119793000-119807400 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr3:119793200-119805400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr3:119795200-119805200 Weak transcription Hela-S3 cervix
29 chr3:119796000-119801000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:119796400-119800600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr3:119796400-119802400 Weak transcription Fetal Heart heart
32 chr3:119796400-119804800 Weak transcription Stomach Mucosa stomach
33 chr3:119796600-119802400 Weak transcription Adipose Nuclei Adipose
34 chr3:119796600-119804600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:119796800-119806000 Enhancers Primary T helper cells PMA-I stimulated --
36 chr3:119797000-119807400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr3:119797000-119807800 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr3:119797200-119801200 Enhancers Primary T helper cells fromperipheralblood blood
39 chr3:119797200-119802000 Weak transcription Brain Hippocampus Middle brain
40 chr3:119797200-119807600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr3:119797400-119800400 Weak transcription Dnd41 blood
42 chr3:119797600-119801000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr3:119797600-119801000 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr3:119797600-119801000 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr3:119797600-119808000 Weak transcription NHLF lung
46 chr3:119797800-119800400 Enhancers Psoas Muscle Psoas
47 chr3:119797800-119804400 Weak transcription Fetal Brain Male brain
48 chr3:119797800-119805200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:119798000-119805400 Weak transcription Duodenum Mucosa Duodenum
50 chr3:119798000-119807600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015