Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10020087	0.87[ASN][1000 genomes]
rs11932956	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11933530	1.00[CHD][hapmap]
rs11937324	0.87[ASN][1000 genomes]
rs11940312	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17056919	0.80[EUR][1000 genomes]
rs17056925	0.80[EUR][1000 genomes]
rs17057196	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17057198	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17210635	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17270004	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35188354	0.80[EUR][1000 genomes]
rs59189112	0.87[ASN][1000 genomes]
rs6843923	0.87[ASN][1000 genomes]
rs72989011	0.87[ASN][1000 genomes]
rs72989015	1.00[ASN][1000 genomes]
rs72989052	0.87[ASN][1000 genomes]
rs7661463	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7693527	0.87[ASN][1000 genomes]
rs7698881	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022077	chr4:172460997-172609297	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv537356	chr4:172460997-172609297	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:172507600-172511800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr4:172508800-172509400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr4:172508800-172509400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr4:172509000-172510800	Enhancers	HUES48 Cell Line	embryonic stem cell

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