Variant report

Variant	rs7672909
Chromosome Location	chr4:166473425-166473426
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10016914	0.92[ASN][1000 genomes]
rs10020515	0.92[ASN][1000 genomes]
rs10155080	1.00[CHB][hapmap];0.92[CHD][hapmap];0.94[JPT][hapmap];0.98[ASN][1000 genomes]
rs17631460	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17631610	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2139210	0.81[ASN][1000 genomes]
rs28360736	1.00[ASN][1000 genomes]
rs28435653	0.98[ASN][1000 genomes]
rs4691203	0.92[ASN][1000 genomes]
rs72705426	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72705432	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72705435	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7673165	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7696979	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508327	chr4:166424440-166475679	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv596052	chr4:166454826-166488615	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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