Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10004125	0.81[ASN][1000 genomes]
rs10016914	0.94[ASN][1000 genomes]
rs10020515	0.94[ASN][1000 genomes]
rs10155080	1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[ASN][1000 genomes]
rs1320227	0.81[ASN][1000 genomes]
rs13340296	0.81[ASN][1000 genomes]
rs17631460	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17631610	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2139210	0.83[ASN][1000 genomes]
rs28360736	0.98[ASN][1000 genomes]
rs28435653	1.00[ASN][1000 genomes]
rs4515120	0.82[ASN][1000 genomes]
rs4691203	0.94[ASN][1000 genomes]
rs59998429	0.81[ASN][1000 genomes]
rs67582214	0.81[ASN][1000 genomes]
rs6821186	0.81[ASN][1000 genomes]
rs6854385	0.81[ASN][1000 genomes]
rs72705426	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72705432	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72705435	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7440432	0.81[ASN][1000 genomes]
rs7672909	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7696979	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508327	chr4:166424440-166475679	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv596052	chr4:166454826-166488615	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: