Variant report

Variant	rs7685216
Chromosome Location	chr4:77021381-77021382
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs17001246	1.00[AMR][1000 genomes]
rs17001265	1.00[AMR][1000 genomes]
rs17001277	1.00[AMR][1000 genomes]
rs17001289	1.00[AMR][1000 genomes]
rs17001354	1.00[AMR][1000 genomes]
rs17001355	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001359	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001362	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001366	1.00[AMR][1000 genomes]
rs17001367	1.00[AMR][1000 genomes]
rs17001369	1.00[YRI][hapmap]
rs17001596	1.00[AMR][1000 genomes]
rs17001619	1.00[AMR][1000 genomes]
rs17001626	1.00[AMR][1000 genomes]
rs17001627	1.00[AMR][1000 genomes]
rs17001636	1.00[AMR][1000 genomes]
rs17001639	1.00[AMR][1000 genomes]
rs41457447	1.00[AMR][1000 genomes]
rs4382064	1.00[AMR][1000 genomes]
rs4487370	1.00[AMR][1000 genomes]
rs55998455	1.00[AMR][1000 genomes]
rs56252973	1.00[AMR][1000 genomes]
rs56350100	1.00[AMR][1000 genomes]
rs56653729	1.00[AMR][1000 genomes]
rs57005804	1.00[AMR][1000 genomes]
rs57415085	1.00[AMR][1000 genomes]
rs58605269	1.00[AMR][1000 genomes]
rs60337837	1.00[AMR][1000 genomes]
rs60367545	1.00[AMR][1000 genomes]
rs60885790	1.00[AMR][1000 genomes]
rs61253655	1.00[AMR][1000 genomes]
rs61347786	1.00[AMR][1000 genomes]
rs61606865	1.00[AMR][1000 genomes]
rs62639704	1.00[AMR][1000 genomes]
rs73825715	1.00[AMR][1000 genomes]
rs73825720	1.00[AMR][1000 genomes]
rs73825882	1.00[AMR][1000 genomes]
rs73826307	1.00[AMR][1000 genomes]
rs73826308	1.00[AMR][1000 genomes]
rs73826311	0.86[AFR][1000 genomes]
rs73826312	1.00[AMR][1000 genomes]
rs73826315	1.00[AMR][1000 genomes]
rs73826333	1.00[AMR][1000 genomes]
rs73826378	1.00[AMR][1000 genomes]
rs73826380	1.00[AMR][1000 genomes]
rs73826385	1.00[AMR][1000 genomes]
rs73826388	1.00[AMR][1000 genomes]
rs7661525	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529613	chr4:76654941-77081576	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv1009047	chr4:76989180-77077885	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:77015200-77025400	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr4:77016400-77025000	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr4:77017000-77034400	Weak transcription	Right Ventricle	heart
4	chr4:77021200-77026600	Weak transcription	Brain Hippocampus Middle	brain

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