Variant report

Variant	rs7695750
Chromosome Location	chr4:129331336-129331337
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11098961	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11098972	1.00[AMR][1000 genomes]
rs1216414	1.00[AMR][1000 genomes]
rs1216421	1.00[AMR][1000 genomes]
rs1216423	1.00[AMR][1000 genomes]
rs1216429	1.00[AMR][1000 genomes]
rs1216430	1.00[AMR][1000 genomes]
rs17013246	1.00[CHB][hapmap];0.89[JPT][hapmap];0.87[ASN][1000 genomes]
rs17013258	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59018637	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60220093	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60570598	1.00[EUR][1000 genomes]
rs61069673	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61268946	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61697796	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73850337	1.00[AMR][1000 genomes]
rs7687777	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869258	chr4:129191619-130138148	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:129331200-129331400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:129331200-129331600	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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