Variant report

Variant	rs7708625
Chromosome Location	chr5:41174425-41174426
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:41154621..41156328-chr5:41174329..41175959,2	K562	blood:

Variant related genes	Relation type
ENSG00000039537	Chromatin interaction

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10074213	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10076584	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10512765	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16870999	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16871009	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16871031	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16900139	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3805718	1.00[CHB][hapmap]
rs55944224	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56080361	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs59735840	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61733159	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6861707	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6881203	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6889037	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73074048	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73074049	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73074097	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73074102	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075915	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73753103	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73753126	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73753136	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7717903	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7728302	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41139800-41182000	Weak transcription	Left Ventricle	heart
2	chr5:41151000-41181400	Weak transcription	Fetal Intestine Small	intestine
3	chr5:41159000-41181800	Weak transcription	Right Ventricle	heart
4	chr5:41168200-41175200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:41169600-41181800	Weak transcription	Ovary	ovary
6	chr5:41171800-41181600	Weak transcription	Fetal Intestine Large	intestine
7	chr5:41173400-41184000	Weak transcription	Pancreas	Pancrea
8	chr5:41173800-41175000	Strong transcription	Liver	Liver

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