Variant report

Variant	rs7714101
Chromosome Location	chr5:124663335-124663336
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1017470	0.82[AMR][1000 genomes]
rs11743821	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11747346	0.81[AMR][1000 genomes]
rs12522070	0.82[AMR][1000 genomes]
rs1400871	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1400873	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1444652	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17152634	0.84[AMR][1000 genomes]
rs1822758	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2589379	0.80[AMR][1000 genomes]
rs2678184	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55751073	0.86[AMR][1000 genomes]
rs58587494	0.82[AMR][1000 genomes]
rs59888177	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61536888	0.81[AMR][1000 genomes]
rs6873529	0.86[AMR][1000 genomes]
rs7707387	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7707447	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7712739	0.80[AMR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124649400-124672400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr5:124659800-124667400	Weak transcription	Brain Hippocampus Middle	brain
3	chr5:124659800-124667600	Weak transcription	Fetal Brain Male	brain
4	chr5:124661200-124663800	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr5:124661800-124666200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr5:124661800-124675800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr5:124662200-124663400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr5:124662200-124667200	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr5:124662600-124663800	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr5:124662800-124663800	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr5:124663000-124663400	Enhancers	H1 Cell Line	embryonic stem cell
12	chr5:124663000-124663800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr5:124663200-124663400	Enhancers	H9 Cell Line	embryonic stem cell
14	chr5:124663200-124663800	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr5:124663200-124663800	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr5:124663200-124663800	Enhancers	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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