Variant report

Variant	rs7719889
Chromosome Location	chr5:36422390-36422391
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:36415024..36418425-chr5:36419163..36425113,5	K562	blood:

rs_ID	r²[population]
rs10452459	1.00[EUR][1000 genomes]
rs1500223	1.00[EUR][1000 genomes]
rs1500225	1.00[EUR][1000 genomes]
rs16902858	1.00[EUR][1000 genomes]
rs16902910	1.00[EUR][1000 genomes]
rs16902936	1.00[EUR][1000 genomes]
rs2362981	1.00[EUR][1000 genomes]
rs56815690	1.00[EUR][1000 genomes]
rs58131800	1.00[EUR][1000 genomes]
rs59754678	1.00[EUR][1000 genomes]
rs60083069	1.00[EUR][1000 genomes]
rs61209349	1.00[EUR][1000 genomes]
rs61656343	1.00[EUR][1000 genomes]
rs6451267	1.00[EUR][1000 genomes]
rs6886540	1.00[EUR][1000 genomes]
rs6898451	1.00[EUR][1000 genomes]
rs73081933	1.00[EUR][1000 genomes]
rs73081942	1.00[EUR][1000 genomes]
rs73081945	1.00[EUR][1000 genomes]
rs7709624	1.00[EUR][1000 genomes]
rs7725596	1.00[EUR][1000 genomes]
rs7730301	1.00[EUR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36415600-36422600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr5:36415600-36423000	Weak transcription	Fetal Kidney	kidney
3	chr5:36415600-36423200	Weak transcription	Brain Anterior Caudate	brain
4	chr5:36416800-36423600	Weak transcription	Fetal Muscle Leg	muscle
5	chr5:36418800-36422400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr5:36418800-36423000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr5:36419000-36422800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr5:36419000-36423000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr5:36419200-36422600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr5:36419200-36422600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr5:36419800-36422800	Weak transcription	NHEK	skin
12	chr5:36419800-36430200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr5:36420200-36423000	Weak transcription	Primary T cells from cord blood	blood
14	chr5:36420200-36423200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:36420200-36423400	Weak transcription	Fetal Thymus	thymus
16	chr5:36420200-36423600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr5:36420200-36423800	Weak transcription	Primary hematopoietic stem cells	blood
18	chr5:36420200-36423800	Weak transcription	Stomach Mucosa	stomach
19	chr5:36420400-36422400	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr5:36420400-36423000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr5:36421000-36423600	Weak transcription	Fetal Intestine Large	intestine
22	chr5:36421400-36423600	Enhancers	Hela-S3	cervix
23	chr5:36422200-36424200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr5:36422200-36424400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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