Variant report

Variant	rs7721093
Chromosome Location	chr5:40738940-40738941
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:40738727..40741044-chr5:40742563..40745555,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10035235	1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs10053664	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10062565	0.84[JPT][hapmap]
rs10066459	1.00[JPT][hapmap];0.92[YRI][hapmap]
rs10069737	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1015027	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10941525	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs11747210	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12514352	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12517210	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12520058	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12523329	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1363847	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2270625	0.84[JPT][hapmap]
rs2291782	0.84[JPT][hapmap]
rs3792824	0.96[ASN][1000 genomes]
rs3792827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3805489	1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs3805490	1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs3805492	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs3805494	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs3805499	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3816959	0.84[JPT][hapmap]
rs4957334	1.00[JPT][hapmap];0.85[YRI][hapmap]
rs4957350	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62357564	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6868112	0.84[JPT][hapmap]
rs7719692	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7725810	0.84[JPT][hapmap]
rs9800106	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7721093	RPL37	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:40692400-40741200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr5:40709600-40745000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr5:40712800-40741200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr5:40713200-40740600	Weak transcription	Right Ventricle	heart
5	chr5:40714600-40739400	Weak transcription	GM12878-XiMat	blood
6	chr5:40715400-40739400	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr5:40721200-40739600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr5:40721400-40739600	Weak transcription	Placenta	Placenta
9	chr5:40721400-40741400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr5:40721800-40739000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr5:40721800-40740600	Weak transcription	Fetal Brain Male	brain
12	chr5:40722200-40739400	Weak transcription	Primary B cells from cord blood	blood
13	chr5:40722800-40739200	Weak transcription	Fetal Brain Female	brain
14	chr5:40722800-40741400	Weak transcription	Aorta	Aorta
15	chr5:40722800-40755200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr5:40723000-40741600	Weak transcription	Lung	lung
17	chr5:40724200-40740600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr5:40724600-40740800	Weak transcription	Fetal Muscle Trunk	muscle
19	chr5:40724800-40740600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr5:40728200-40739000	Weak transcription	Primary B cells from peripheral blood	blood
21	chr5:40728200-40745600	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr5:40728400-40739400	Weak transcription	Left Ventricle	heart
23	chr5:40728600-40739400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr5:40728600-40739400	Weak transcription	Thymus	Thymus
25	chr5:40728600-40740400	Weak transcription	Fetal Thymus	thymus
26	chr5:40728600-40741200	Weak transcription	Fetal Stomach	stomach
27	chr5:40728800-40741200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr5:40729000-40741400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr5:40729200-40739400	Weak transcription	Primary neutrophils fromperipheralblood	blood
30	chr5:40729200-40741400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr5:40730400-40739600	Weak transcription	Primary T helper cells fromperipheralblood	blood
32	chr5:40734000-40739400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr5:40734000-40739600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr5:40734000-40739600	Weak transcription	Fetal Muscle Leg	muscle
35	chr5:40734200-40740800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr5:40734200-40741600	Weak transcription	Psoas Muscle	Psoas
37	chr5:40734400-40739600	Weak transcription	Primary monocytes fromperipheralblood	blood
38	chr5:40734400-40739600	Weak transcription	HSMMtube	muscle
39	chr5:40734400-40740600	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr5:40734400-40741400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr5:40734600-40739000	Weak transcription	Monocytes-CD14+_RO01746	blood
42	chr5:40734800-40739000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr5:40734800-40740600	Weak transcription	Stomach Smooth Muscle	stomach
44	chr5:40735000-40740400	Weak transcription	Colonic Mucosa	Colon
45	chr5:40735000-40741400	Weak transcription	Rectal Smooth Muscle	rectum
46	chr5:40735200-40739000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr5:40735200-40739600	Weak transcription	Esophagus	oesophagus
48	chr5:40735200-40740200	Weak transcription	Fetal Kidney	kidney
49	chr5:40735400-40739000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr5:40735400-40740600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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