Variant report

Variant	rs7744213
Chromosome Location	chr6:88482324-88482325
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:88410522..88413208-chr6:88481678..88483564,2	K562	blood:
2	chr6:88482172..88484014-chr6:88484213..88486157,2	K562	blood:

Variant related genes	Relation type
ENSG00000135334	Chromatin interaction

rs_ID	r²[population]
rs12190021	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[TSI][hapmap]
rs12192057	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12193728	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12194652	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12203759	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[TSI][hapmap]
rs12209285	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193470	1.00[CHB][hapmap]
rs13203790	1.00[CHB][hapmap]
rs13206536	1.00[CHB][hapmap]
rs13219631	1.00[CHB][hapmap]
rs2307393	1.00[CHB][hapmap]
rs28381552	1.00[CHB][hapmap]
rs3763176	1.00[CHB][hapmap]
rs4339426	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59704833	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61546689	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6902069	1.00[CHB][hapmap]
rs6921294	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6927654	1.00[CHB][hapmap]
rs6927826	1.00[CHB][hapmap]
rs6929542	1.00[CHB][hapmap]
rs7738268	1.00[CHB][hapmap]
rs7749032	1.00[CHB][hapmap]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88457800-88482400	Weak transcription	Placenta	Placenta
2	chr6:88479800-88482600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:88480400-88482600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:88481600-88483000	Enhancers	Fetal Stomach	stomach
5	chr6:88481600-88483600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr6:88481600-88483600	Enhancers	Fetal Lung	lung
7	chr6:88481800-88482600	Weak transcription	Ovary	ovary
8	chr6:88482000-88482400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr6:88482000-88483200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr6:88482000-88483600	Flanking Active TSS	HepG2	liver
11	chr6:88482200-88482400	Enhancers	A549	lung
12	chr6:88482200-88482600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr6:88482200-88482600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr6:88482200-88482600	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr6:88482200-88482800	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr6:88482200-88482800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr6:88482200-88482800	Enhancers	K562	blood
18	chr6:88482200-88483400	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr6:88482200-88483400	Enhancers	Fetal Intestine Large	intestine
20	chr6:88482200-88483600	Enhancers	HUES6 Cell Line	embryonic stem cell
21	chr6:88482200-88483600	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr6:88482200-88483600	Enhancers	Fetal Kidney	kidney

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