Variant report

Variant	rs7749032
Chromosome Location	chr6:88316186-88316187
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:88313795..88316259-chr6:88331275..88334158,3	K562	blood:
2	chr6:88299715..88302499-chr6:88315597..88317409,2	MCF-7	breast:
3	chr6:88313970..88315547-chr6:88315693..88317201,2	K562	blood:

Variant related genes	Relation type
ENSG00000146282	Chromatin interaction
ENSG00000135336	Chromatin interaction

Extended variants
information (count: 205 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:201)

rs_ID	r²[population]
rs10080513	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11962998	1.00[ASN][1000 genomes]
rs12190021	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12203759	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13192889	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13193193	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13193303	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193470	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193703	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193911	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193927	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13196538	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13196755	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13197090	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13198094	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13198372	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13200106	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13202825	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13203056	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13203649	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13203790	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13203957	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13204592	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13204861	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13205357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13206240	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13206485	1.00[ASN][1000 genomes]
rs13206536	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13206957	1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13208201	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13208550	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13208933	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13210643	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13211439	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13211833	0.81[EUR][1000 genomes]
rs13211892	1.00[ASN][1000 genomes]
rs13212076	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13212089	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13213285	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13213812	1.00[ASN][1000 genomes]
rs13215013	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13215887	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13216482	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13216724	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13216727	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13219631	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs16879475	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879490	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879507	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879510	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879517	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879528	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879532	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17454834	0.87[EUR][1000 genomes]
rs17455002	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17504209	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17504475	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17504517	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs2273130	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2273131	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307383	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307389	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307393	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28360511	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28381452	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28381487	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28381518	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28381552	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385570	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385591	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385632	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34006571	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34007246	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34008333	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34054042	1.00[ASN][1000 genomes]
rs34054261	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34107692	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34154420	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34220026	1.00[ASN][1000 genomes]
rs34369446	1.00[ASN][1000 genomes]
rs34385811	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34395299	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34423353	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34455158	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34540725	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34547532	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34650015	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34727395	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34926624	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34934063	0.89[ASN][1000 genomes]
rs34941612	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35031351	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35056836	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35058527	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35116392	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35145047	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35234062	1.00[ASN][1000 genomes]
rs35237504	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35289945	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35303040	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35317752	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35324020	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35326820	0.81[EUR][1000 genomes]
rs35350424	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35363104	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35396056	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35440627	0.81[EUR][1000 genomes]
rs35465301	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35494431	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35504787	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35593940	0.87[EUR][1000 genomes]
rs35607770	0.81[EUR][1000 genomes]
rs35610797	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35679038	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35688969	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35866706	0.84[EUR][1000 genomes]
rs35903880	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35917348	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35925514	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35946241	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35965137	0.81[EUR][1000 genomes]
rs35972482	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36020402	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36041712	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36090981	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3734908	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3757369	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3757371	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3763176	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs3800551	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3823469	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4409162	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4587137	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55751639	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55759644	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55765303	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55766457	1.00[ASN][1000 genomes]
rs55880748	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55960393	0.89[ASN][1000 genomes]
rs56004408	1.00[ASN][1000 genomes]
rs56031077	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57526195	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59361639	1.00[ASN][1000 genomes]
rs60313720	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417663	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417666	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417673	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417674	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417675	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417676	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417680	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62417686	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417689	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417692	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417693	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417698	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62417699	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417701	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417715	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417718	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417720	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417727	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417753	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62417757	0.81[EUR][1000 genomes]
rs62419377	1.00[ASN][1000 genomes]
rs62419378	1.00[ASN][1000 genomes]
rs62419386	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6900057	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6902069	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6905345	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6905480	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911442	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911548	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6917424	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6926321	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6927654	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6927826	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6929542	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6940675	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71548716	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7738268	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7739772	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7740476	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7741170	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7742607	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7744190	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7744213	1.00[CHB][hapmap]
rs7750528	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7750775	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7750877	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7754550	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7757446	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7759422	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7759648	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7760840	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7760919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7770458	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7771832	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9444507	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9450703	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs9450714	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031961	chr6:88110401-88367006	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv1031460	chr6:88153079-88410050	Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	nsv1026482	chr6:88164934-88409728	Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
4	nsv1027706	chr6:88168987-88409728	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88300400-88320800	Weak transcription	Spleen	Spleen
2	chr6:88300400-88323400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:88300600-88320000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr6:88300600-88321800	Weak transcription	Lung	lung
5	chr6:88300600-88323400	Weak transcription	Gastric	stomach
6	chr6:88300600-88391200	Weak transcription	Colonic Mucosa	Colon
7	chr6:88300800-88320600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr6:88300800-88323600	Weak transcription	Aorta	Aorta
9	chr6:88301000-88316400	Weak transcription	Pancreas	Pancrea
10	chr6:88301000-88321000	Weak transcription	Brain Angular Gyrus	brain
11	chr6:88301000-88321000	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr6:88301000-88323600	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr6:88301000-88330200	Weak transcription	Right Ventricle	heart
14	chr6:88301000-88347200	Weak transcription	Small Intestine	intestine
15	chr6:88301200-88316200	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr6:88301200-88320800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr6:88301200-88320800	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr6:88301200-88323400	Weak transcription	Thymus	Thymus
19	chr6:88301200-88385000	Weak transcription	Colon Smooth Muscle	Colon
20	chr6:88301400-88320800	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr6:88301400-88321000	Weak transcription	Brain Hippocampus Middle	brain
22	chr6:88301400-88322400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
23	chr6:88301400-88338400	Weak transcription	NHLF	lung
24	chr6:88301400-88354400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
25	chr6:88301400-88354600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
26	chr6:88301600-88320800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr6:88301800-88319800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:88302000-88347400	Weak transcription	Brain Cingulate Gyrus	brain
29	chr6:88302000-88354400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
30	chr6:88302000-88354600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
31	chr6:88302800-88318800	Weak transcription	HepG2	liver
32	chr6:88305000-88398800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr6:88305200-88316200	Weak transcription	K562	blood
34	chr6:88305200-88329000	Weak transcription	HSMMtube	muscle
35	chr6:88305400-88316200	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr6:88305400-88317000	Weak transcription	Osteobl	bone
37	chr6:88305400-88317800	Weak transcription	Primary B cells from cord blood	blood
38	chr6:88305400-88320800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
39	chr6:88305400-88320800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr6:88305600-88316200	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr6:88305600-88320800	Weak transcription	Fetal Kidney	kidney
42	chr6:88305600-88320800	Weak transcription	Fetal Lung	lung
43	chr6:88305600-88322400	Weak transcription	Brain Anterior Caudate	brain
44	chr6:88305600-88322400	Weak transcription	Psoas Muscle	Psoas
45	chr6:88305800-88316200	Weak transcription	Primary B cells from peripheral blood	blood
46	chr6:88305800-88317400	Weak transcription	Primary T cells from cord blood	blood
47	chr6:88305800-88320800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr6:88305800-88320800	Weak transcription	Duodenum Mucosa	Duodenum
49	chr6:88305800-88325200	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr6:88306000-88320800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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