The 2.0 version of rSNPBase

Variant report

Variant rs62419377
Chromosome Location chr6:88211851-88211852
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88183600-88212800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:88183600-88226000 Weak transcription Gastric stomach
3 chr6:88183800-88212000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr6:88183800-88212600 Weak transcription Psoas Muscle Psoas
5 chr6:88183800-88216400 Weak transcription K562 blood
6 chr6:88183800-88219800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:88183800-88221000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:88183800-88221000 Weak transcription Fetal Kidney kidney
9 chr6:88183800-88225400 Weak transcription Aorta Aorta
10 chr6:88183800-88227400 Weak transcription Right Ventricle heart
11 chr6:88184000-88218600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:88184000-88218600 Weak transcription Brain Angular Gyrus brain
13 chr6:88184000-88218800 Weak transcription Brain Germinal Matrix brain
14 chr6:88184000-88219800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr6:88184000-88221000 Weak transcription Colon Smooth Muscle Colon
16 chr6:88184000-88224200 Weak transcription Hela-S3 cervix
17 chr6:88184200-88214800 Weak transcription Fetal Brain Male brain
18 chr6:88188600-88221600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr6:88191200-88227400 Weak transcription Spleen Spleen
20 chr6:88193600-88214200 Weak transcription HSMMtube muscle
21 chr6:88193600-88227600 Weak transcription Pancreas Pancrea
22 chr6:88193800-88220400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:88193800-88221000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr6:88193800-88221400 Weak transcription Ovary ovary
25 chr6:88193800-88227400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:88194000-88214200 Weak transcription NHLF lung
27 chr6:88194000-88226200 Weak transcription Lung lung
28 chr6:88194000-88249000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:88194200-88221400 Weak transcription Colonic Mucosa Colon
30 chr6:88194400-88212400 Weak transcription Fetal Stomach stomach
31 chr6:88194400-88212600 Weak transcription Fetal Muscle Trunk muscle
32 chr6:88194400-88213000 Weak transcription Esophagus oesophagus
33 chr6:88194600-88228200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:88194800-88214400 Weak transcription NHEK skin
35 chr6:88197600-88212000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:88197600-88212400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:88197600-88215800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr6:88197800-88212400 Weak transcription NH-A brain
39 chr6:88198800-88223600 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr6:88199000-88219800 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr6:88199200-88212200 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr6:88200600-88227400 Weak transcription Small Intestine intestine
43 chr6:88202200-88212600 Weak transcription A549 lung
44 chr6:88205000-88213000 Weak transcription Fetal Intestine Small intestine
45 chr6:88205200-88224600 Weak transcription Stomach Mucosa stomach
46 chr6:88207200-88242600 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr6:88208600-88215000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr6:88210000-88219000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:88210000-88223200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr6:88210200-88213400 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015