The 2.0 version of rSNPBase

Variant report

Variant rs28381487
Chromosome Location chr6:88320798-88320799
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88300400-88320800 Weak transcription Spleen Spleen
2 chr6:88300400-88323400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:88300600-88321800 Weak transcription Lung lung
4 chr6:88300600-88323400 Weak transcription Gastric stomach
5 chr6:88300600-88391200 Weak transcription Colonic Mucosa Colon
6 chr6:88300800-88323600 Weak transcription Aorta Aorta
7 chr6:88301000-88321000 Weak transcription Brain Angular Gyrus brain
8 chr6:88301000-88321000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:88301000-88323600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:88301000-88330200 Weak transcription Right Ventricle heart
11 chr6:88301000-88347200 Weak transcription Small Intestine intestine
12 chr6:88301200-88320800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr6:88301200-88320800 Weak transcription Placenta Amnion Placenta Amnion
14 chr6:88301200-88323400 Weak transcription Thymus Thymus
15 chr6:88301200-88385000 Weak transcription Colon Smooth Muscle Colon
16 chr6:88301400-88320800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr6:88301400-88321000 Weak transcription Brain Hippocampus Middle brain
18 chr6:88301400-88322400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr6:88301400-88338400 Weak transcription NHLF lung
20 chr6:88301400-88354400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr6:88301400-88354600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr6:88301600-88320800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:88302000-88347400 Weak transcription Brain Cingulate Gyrus brain
24 chr6:88302000-88354400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr6:88302000-88354600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr6:88305000-88398800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr6:88305200-88329000 Weak transcription HSMMtube muscle
28 chr6:88305400-88320800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr6:88305400-88320800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr6:88305600-88320800 Weak transcription Fetal Kidney kidney
31 chr6:88305600-88320800 Weak transcription Fetal Lung lung
32 chr6:88305600-88322400 Weak transcription Brain Anterior Caudate brain
33 chr6:88305600-88322400 Weak transcription Psoas Muscle Psoas
34 chr6:88305800-88320800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:88305800-88320800 Weak transcription Duodenum Mucosa Duodenum
36 chr6:88305800-88325200 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr6:88306000-88320800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr6:88306000-88321600 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr6:88306000-88322400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:88307200-88321000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr6:88307400-88322400 Weak transcription Muscle Satellite Cultured Cells --
42 chr6:88308600-88321800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr6:88308800-88369800 Weak transcription Fetal Brain Male brain
44 chr6:88311400-88334600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:88311600-88320800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:88312200-88371200 Weak transcription NHEK skin
47 chr6:88312400-88380600 Weak transcription Brain Substantia Nigra brain
48 chr6:88313800-88338200 Weak transcription NHDF-Ad bronchial
49 chr6:88314000-88384800 Weak transcription Hela-S3 cervix
50 chr6:88314200-88399200 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015