Variant report

Variant rs62417674
Chromosome Location chr6:88249745-88249746
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88217800-88295800 Weak transcription Fetal Brain Male brain
2 chr6:88225000-88250800 Weak transcription Stomach Mucosa stomach
3 chr6:88227000-88250200 Weak transcription Fetal Heart heart
4 chr6:88227800-88298800 Weak transcription Esophagus oesophagus
5 chr6:88228400-88250200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:88228400-88298400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:88228600-88249800 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr6:88228600-88254000 Weak transcription Gastric stomach
9 chr6:88228600-88262800 Weak transcription Small Intestine intestine
10 chr6:88228600-88271400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:88228600-88285200 Weak transcription Spleen Spleen
12 chr6:88228800-88253800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr6:88228800-88269600 Weak transcription Brain Cingulate Gyrus brain
14 chr6:88229400-88261600 Weak transcription Rectal Smooth Muscle rectum
15 chr6:88229400-88271200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr6:88229600-88254000 Weak transcription Brain Anterior Caudate brain
17 chr6:88229600-88289000 Weak transcription Lung lung
18 chr6:88230000-88267000 Weak transcription Brain Substantia Nigra brain
19 chr6:88230400-88271200 Weak transcription Colon Smooth Muscle Colon
20 chr6:88230600-88254400 Weak transcription Psoas Muscle Psoas
21 chr6:88230800-88249800 Weak transcription Ovary ovary
22 chr6:88230800-88250600 Weak transcription HSMMtube muscle
23 chr6:88230800-88261600 Weak transcription Brain Hippocampus Middle brain
24 chr6:88231200-88262800 Weak transcription Brain Angular Gyrus brain
25 chr6:88231200-88264200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr6:88238800-88253200 Weak transcription K562 blood
27 chr6:88239200-88250400 Weak transcription HUVEC blood vessel
28 chr6:88240000-88253800 Weak transcription Right Ventricle heart
29 chr6:88240200-88250200 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:88240200-88254000 Weak transcription Colonic Mucosa Colon
31 chr6:88240600-88250400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr6:88240600-88254000 Weak transcription Fetal Brain Female brain
33 chr6:88240600-88268200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr6:88240800-88250200 Weak transcription H1 Cell Line embryonic stem cell
35 chr6:88240800-88250200 Weak transcription NHEK skin
36 chr6:88240800-88250400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr6:88242400-88254000 Weak transcription NHLF lung
38 chr6:88244600-88253400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr6:88244800-88249800 Weak transcription Adipose Nuclei Adipose
40 chr6:88244800-88250200 Weak transcription Pancreas Pancrea
41 chr6:88244800-88254000 Weak transcription Left Ventricle heart
42 chr6:88244800-88254400 Weak transcription Aorta Aorta
43 chr6:88246600-88249800 Strong transcription Fetal Thymus thymus
44 chr6:88246600-88252200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr6:88246600-88252200 Strong transcription NHDF-Ad bronchial
46 chr6:88246800-88251800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr6:88247000-88251800 Strong transcription Fetal Intestine Large intestine
48 chr6:88247200-88251000 Strong transcription NH-A brain
49 chr6:88248000-88250200 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr6:88248000-88251200 Strong transcription Rectal Mucosa Donor 31 rectum

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