The 2.0 version of rSNPBase

Variant report

Variant rs35925514
Chromosome Location chr6:88339180-88339181
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88300600-88391200 Weak transcription Colonic Mucosa Colon
2 chr6:88301000-88347200 Weak transcription Small Intestine intestine
3 chr6:88301200-88385000 Weak transcription Colon Smooth Muscle Colon
4 chr6:88301400-88354400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:88301400-88354600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr6:88302000-88347400 Weak transcription Brain Cingulate Gyrus brain
7 chr6:88302000-88354400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:88302000-88354600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr6:88305000-88398800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:88308800-88369800 Weak transcription Fetal Brain Male brain
11 chr6:88312200-88371200 Weak transcription NHEK skin
12 chr6:88312400-88380600 Weak transcription Brain Substantia Nigra brain
13 chr6:88314000-88384800 Weak transcription Hela-S3 cervix
14 chr6:88314200-88399200 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr6:88314600-88385000 Weak transcription Esophagus oesophagus
16 chr6:88316600-88381200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:88316600-88390000 Weak transcription Pancreas Pancrea
18 chr6:88320400-88400800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:88321200-88348400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:88321600-88350000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr6:88322000-88346200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr6:88322000-88352800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr6:88322600-88344800 Weak transcription HMEC breast
24 chr6:88322800-88344000 Weak transcription Liver Liver
25 chr6:88322800-88344800 Weak transcription NH-A brain
26 chr6:88322800-88382000 Weak transcription Placenta Amnion Placenta Amnion
27 chr6:88323000-88342000 Weak transcription K562 blood
28 chr6:88323000-88344600 Weak transcription Brain Hippocampus Middle brain
29 chr6:88323000-88344800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:88323000-88346200 Weak transcription Fetal Kidney kidney
31 chr6:88323000-88366400 Weak transcription A549 lung
32 chr6:88324000-88344000 Weak transcription H9 Cell Line embryonic stem cell
33 chr6:88324000-88347400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr6:88324000-88369800 Weak transcription Rectal Smooth Muscle rectum
35 chr6:88324000-88385000 Weak transcription Gastric stomach
36 chr6:88324200-88339200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr6:88324200-88339800 Weak transcription Ovary ovary
38 chr6:88324200-88344800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr6:88324200-88346000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:88324200-88346200 Weak transcription Fetal Brain Female brain
41 chr6:88324200-88350600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr6:88324200-88366600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr6:88324200-88369000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:88324200-88370200 Weak transcription Psoas Muscle Psoas
45 chr6:88324200-88378200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:88324200-88380400 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr6:88324400-88344600 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr6:88324800-88341400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr6:88324800-88344000 Weak transcription Duodenum Mucosa Duodenum
50 chr6:88325200-88344800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015