Variant report
| Variant | rs62417753 |
|---|---|
| Chromosome Location | chr6:88380612-88380613 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:88300600-88391200 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr6:88301200-88385000 | Weak transcription | Colon Smooth Muscle | Colon |
| 3 | chr6:88305000-88398800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr6:88314000-88384800 | Weak transcription | Hela-S3 | cervix |
| 5 | chr6:88314200-88399200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr6:88314600-88385000 | Weak transcription | Esophagus | oesophagus |
| 7 | chr6:88316600-88381200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr6:88316600-88390000 | Weak transcription | Pancreas | Pancrea |
| 9 | chr6:88320400-88400800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 10 | chr6:88322800-88382000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 11 | chr6:88324000-88385000 | Weak transcription | Gastric | stomach |
| 12 | chr6:88329800-88383200 | Weak transcription | Lung | lung |
| 13 | chr6:88333400-88384800 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr6:88339200-88396800 | Weak transcription | Right Ventricle | heart |
| 15 | chr6:88344400-88384800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 16 | chr6:88348000-88385000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 17 | chr6:88349200-88381400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 18 | chr6:88349400-88385000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 19 | chr6:88349400-88397400 | Weak transcription | Ovary | ovary |
| 20 | chr6:88358200-88392000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr6:88359800-88381000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 22 | chr6:88363000-88408200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr6:88363200-88395000 | Weak transcription | Stomach Mucosa | stomach |
| 24 | chr6:88364400-88384800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr6:88365000-88390000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr6:88366400-88390000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 27 | chr6:88366600-88390000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 28 | chr6:88367800-88385000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 29 | chr6:88368000-88382000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 30 | chr6:88368000-88393400 | Weak transcription | Small Intestine | intestine |
| 31 | chr6:88370200-88391800 | Weak transcription | Fetal Brain Male | brain |
| 32 | chr6:88370400-88381200 | Weak transcription | Aorta | Aorta |
| 33 | chr6:88370400-88381400 | Weak transcription | HUVEC | blood vessel |
| 34 | chr6:88370400-88384800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 35 | chr6:88371000-88381800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 36 | chr6:88371000-88383000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 37 | chr6:88371400-88381800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr6:88371600-88380800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 39 | chr6:88371600-88383400 | Weak transcription | Psoas Muscle | Psoas |
| 40 | chr6:88371600-88385000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 41 | chr6:88372600-88392000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr6:88372800-88383000 | Weak transcription | Fetal Stomach | stomach |
| 43 | chr6:88373600-88381200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 44 | chr6:88374000-88381000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 45 | chr6:88374200-88391400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 46 | chr6:88374800-88382200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr6:88374800-88382200 | Weak transcription | K562 | blood |
| 48 | chr6:88375600-88384800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 49 | chr6:88376000-88381200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 50 | chr6:88376200-88385800 | Strong transcription | HSMM | muscle |
