The 2.0 version of rSNPBase

Variant report

Variant rs35465301
Chromosome Location chr6:88313908-88313909
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88300400-88320800 Weak transcription Spleen Spleen
2 chr6:88300400-88323400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:88300600-88315800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:88300600-88320000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:88300600-88321800 Weak transcription Lung lung
6 chr6:88300600-88323400 Weak transcription Gastric stomach
7 chr6:88300600-88391200 Weak transcription Colonic Mucosa Colon
8 chr6:88300800-88320600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:88300800-88323600 Weak transcription Aorta Aorta
10 chr6:88301000-88315600 Weak transcription NH-A brain
11 chr6:88301000-88316400 Weak transcription Pancreas Pancrea
12 chr6:88301000-88321000 Weak transcription Brain Angular Gyrus brain
13 chr6:88301000-88321000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr6:88301000-88323600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:88301000-88330200 Weak transcription Right Ventricle heart
16 chr6:88301000-88347200 Weak transcription Small Intestine intestine
17 chr6:88301200-88314000 Weak transcription HMEC breast
18 chr6:88301200-88316200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr6:88301200-88320800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr6:88301200-88320800 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:88301200-88323400 Weak transcription Thymus Thymus
22 chr6:88301200-88385000 Weak transcription Colon Smooth Muscle Colon
23 chr6:88301400-88320800 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr6:88301400-88321000 Weak transcription Brain Hippocampus Middle brain
25 chr6:88301400-88322400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr6:88301400-88338400 Weak transcription NHLF lung
27 chr6:88301400-88354400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr6:88301400-88354600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr6:88301600-88320800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr6:88301800-88319800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:88302000-88347400 Weak transcription Brain Cingulate Gyrus brain
32 chr6:88302000-88354400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr6:88302000-88354600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr6:88302800-88318800 Weak transcription HepG2 liver
35 chr6:88305000-88398800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr6:88305200-88316200 Weak transcription K562 blood
37 chr6:88305200-88329000 Weak transcription HSMMtube muscle
38 chr6:88305400-88315800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr6:88305400-88315800 Weak transcription Rectal Smooth Muscle rectum
40 chr6:88305400-88316000 Weak transcription Primary hematopoietic stem cells blood
41 chr6:88305400-88316000 Weak transcription GM12878-XiMat blood
42 chr6:88305400-88316200 Weak transcription H9 Cell Line embryonic stem cell
43 chr6:88305400-88317000 Weak transcription Osteobl bone
44 chr6:88305400-88317800 Weak transcription Primary B cells from cord blood blood
45 chr6:88305400-88320800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr6:88305400-88320800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr6:88305600-88315600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr6:88305600-88316000 Weak transcription HUVEC blood vessel
49 chr6:88305600-88316200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr6:88305600-88320800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015