Variant report

Variant rs62417699
Chromosome Location chr6:88301786-88301787
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88300400-88302000 Flanking Active TSS Dnd41 blood
2 chr6:88300400-88320800 Weak transcription Spleen Spleen
3 chr6:88300400-88323400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:88300600-88301800 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr6:88300600-88302000 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr6:88300600-88302800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr6:88300600-88315800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr6:88300600-88320000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:88300600-88321800 Weak transcription Lung lung
10 chr6:88300600-88323400 Weak transcription Gastric stomach
11 chr6:88300600-88391200 Weak transcription Colonic Mucosa Colon
12 chr6:88300800-88302000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr6:88300800-88302400 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr6:88300800-88304200 Weak transcription Placenta Placenta
15 chr6:88300800-88304200 Weak transcription Left Ventricle heart
16 chr6:88300800-88304800 Weak transcription Fetal Muscle Trunk muscle
17 chr6:88300800-88311600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr6:88300800-88320600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr6:88300800-88323600 Weak transcription Aorta Aorta
20 chr6:88301000-88301800 Weak transcription Fetal Heart heart
21 chr6:88301000-88301800 Weak transcription Stomach Smooth Muscle stomach
22 chr6:88301000-88302000 Enhancers Primary T helper cells PMA-I stimulated --
23 chr6:88301000-88302000 Enhancers Brain Cingulate Gyrus brain
24 chr6:88301000-88302400 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr6:88301000-88302400 Weak transcription Fetal Thymus thymus
26 chr6:88301000-88302600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr6:88301000-88302800 Weak transcription Fetal Intestine Large intestine
28 chr6:88301000-88303000 Weak transcription Brain Anterior Caudate brain
29 chr6:88301000-88304000 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr6:88301000-88304200 Weak transcription H9 Cell Line embryonic stem cell
31 chr6:88301000-88304200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr6:88301000-88304200 Weak transcription Primary B cells from peripheral blood blood
33 chr6:88301000-88304200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr6:88301000-88304200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr6:88301000-88304200 Weak transcription Fetal Muscle Leg muscle
36 chr6:88301000-88304200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr6:88301000-88304800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr6:88301000-88304800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:88301000-88304800 Weak transcription Primary hematopoietic stem cells blood
40 chr6:88301000-88304800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:88301000-88304800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr6:88301000-88304800 Weak transcription Fetal Kidney kidney
43 chr6:88301000-88304800 Weak transcription Psoas Muscle Psoas
44 chr6:88301000-88305200 Weak transcription Fetal Stomach stomach
45 chr6:88301000-88310000 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:88301000-88311600 Weak transcription Brain Substantia Nigra brain
47 chr6:88301000-88313800 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr6:88301000-88315600 Weak transcription NH-A brain
49 chr6:88301000-88316400 Weak transcription Pancreas Pancrea
50 chr6:88301000-88321000 Weak transcription Brain Angular Gyrus brain

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