Variant report

Variant	rs774859
Chromosome Location	chr3:111685328-111685329
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1295993	1.00[CEU][hapmap]
rs168151	1.00[CEU][hapmap]
rs16858901	1.00[CEU][hapmap]
rs6438029	1.00[CEU][hapmap]
rs6438030	1.00[CEU][hapmap]
rs6765246	1.00[CEU][hapmap]
rs6765524	1.00[CEU][hapmap]
rs6770127	1.00[CEU][hapmap]
rs6774728	1.00[CEU][hapmap]
rs6787297	1.00[CEU][hapmap]
rs6794944	1.00[CEU][hapmap]
rs6806972	1.00[CEU][hapmap]
rs7644889	1.00[CEU][hapmap]

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:111637200-111690600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:111642200-111690400	Weak transcription	Spleen	Spleen
3	chr3:111645400-111689600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr3:111652400-111685800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr3:111653000-111686200	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr3:111654400-111695000	Strong transcription	Placenta	Placenta
7	chr3:111658600-111697400	Weak transcription	Gastric	stomach
8	chr3:111658800-111685800	Weak transcription	HepG2	liver
9	chr3:111661600-111689800	Weak transcription	Ovary	ovary
10	chr3:111666600-111697400	Weak transcription	Esophagus	oesophagus
11	chr3:111672800-111686000	Weak transcription	Fetal Intestine Small	intestine
12	chr3:111673000-111688400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr3:111673000-111688400	Weak transcription	Fetal Stomach	stomach
14	chr3:111673000-111697400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr3:111673000-111697400	Weak transcription	Pancreas	Pancrea
16	chr3:111673600-111686000	Weak transcription	Fetal Kidney	kidney
17	chr3:111675000-111697400	Weak transcription	Lung	lung
18	chr3:111676800-111685800	Weak transcription	Fetal Lung	lung
19	chr3:111678200-111687800	Weak transcription	Right Ventricle	heart
20	chr3:111678200-111692800	Weak transcription	Aorta	Aorta
21	chr3:111678400-111685600	Strong transcription	Adipose Nuclei	Adipose
22	chr3:111680600-111686400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr3:111681000-111685800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
24	chr3:111681000-111686000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr3:111681000-111686000	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr3:111681200-111686000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr3:111681200-111686400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr3:111681200-111686400	Weak transcription	Fetal Thymus	thymus
29	chr3:111681200-111689800	Weak transcription	Thymus	Thymus
30	chr3:111681400-111685600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:111681400-111687000	Weak transcription	Stomach Smooth Muscle	stomach
32	chr3:111681400-111694400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr3:111681400-111697200	Weak transcription	HUES6 Cell Line	embryonic stem cell
34	chr3:111681400-111697400	Weak transcription	Rectal Smooth Muscle	rectum
35	chr3:111682200-111687000	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr3:111682400-111689800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr3:111682400-111694600	Strong transcription	NH-A	brain
38	chr3:111682600-111685400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr3:111682600-111685600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr3:111682600-111690800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
41	chr3:111682800-111685600	Strong transcription	NHEK	skin
42	chr3:111683000-111685800	Weak transcription	Hela-S3	cervix
43	chr3:111683000-111685800	Strong transcription	Osteobl	bone
44	chr3:111683000-111686000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr3:111683000-111686000	Weak transcription	Colon Smooth Muscle	Colon
46	chr3:111683000-111686000	Weak transcription	NHLF	lung
47	chr3:111683000-111686800	Weak transcription	Fetal Muscle Trunk	muscle
48	chr3:111683000-111695200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr3:111683200-111685400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr3:111683200-111685600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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