Variant report
| Variant | rs6770127 |
|---|---|
| Chromosome Location | chr3:111784759-111784760 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr3:111780283..111781991-chr3:111783090..111785256,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:41)
| rs_ID | r2[population] |
|---|---|
| rs1295993 | 1.00[CEU][hapmap] |
| rs168151 | 1.00[CEU][hapmap] |
| rs16858901 | 1.00[CEU][hapmap] |
| rs55992226 | 1.00[AMR][1000 genomes] |
| rs56115505 | 1.00[AMR][1000 genomes] |
| rs56259975 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs57441805 | 1.00[AMR][1000 genomes] |
| rs58430773 | 1.00[AMR][1000 genomes] |
| rs58938674 | 1.00[AMR][1000 genomes] |
| rs61440289 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6438029 | 1.00[CEU][hapmap] |
| rs6438030 | 1.00[CEU][hapmap] |
| rs6438036 | 1.00[AMR][1000 genomes] |
| rs6765246 | 1.00[CEU][hapmap] |
| rs6765524 | 1.00[CEU][hapmap] |
| rs6768781 | 1.00[AMR][1000 genomes] |
| rs6774728 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes] |
| rs6779013 | 1.00[AMR][1000 genomes] |
| rs6785852 | 1.00[AMR][1000 genomes] |
| rs6787297 | 1.00[CEU][hapmap] |
| rs6794944 | 1.00[CEU][hapmap] |
| rs6806972 | 1.00[CEU][hapmap] |
| rs6809741 | 1.00[AMR][1000 genomes] |
| rs73853320 | 1.00[AMR][1000 genomes] |
| rs73853321 | 1.00[AMR][1000 genomes] |
| rs73853325 | 1.00[AMR][1000 genomes] |
| rs73853326 | 1.00[AMR][1000 genomes] |
| rs73853328 | 1.00[AMR][1000 genomes] |
| rs73853330 | 1.00[AMR][1000 genomes] |
| rs73853364 | 1.00[AMR][1000 genomes] |
| rs73853368 | 1.00[AMR][1000 genomes] |
| rs73853369 | 1.00[AMR][1000 genomes] |
| rs73853377 | 1.00[AMR][1000 genomes] |
| rs73856350 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73856359 | 1.00[AMR][1000 genomes] |
| rs7621703 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7622023 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7631233 | 1.00[AMR][1000 genomes] |
| rs7644889 | 1.00[CEU][hapmap] |
| rs7648969 | 1.00[AMR][1000 genomes] |
| rs774859 | 1.00[CEU][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:111780800-111793800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr3:111784200-111785200 | Weak transcription | Fetal Thymus | thymus |
| 3 | chr3:111784400-111785600 | Enhancers | Thymus | Thymus |
