Variant report

Variant rs57441805
Chromosome Location chr3:111855992-111855993
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111848200-111857000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:111848400-111856000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr3:111848400-111856800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:111852200-111857000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr3:111852200-111857600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr3:111852200-111863400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr3:111852400-111856200 Enhancers Fetal Thymus thymus
8 chr3:111852400-111856200 Enhancers Thymus Thymus
9 chr3:111852400-111856600 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr3:111852400-111856600 Flanking Active TSS GM12878-XiMat blood
11 chr3:111852400-111857000 Enhancers Primary B cells from cord blood blood
12 chr3:111852400-111857200 Enhancers Primary B cells from peripheral blood blood
13 chr3:111852600-111856600 Enhancers Primary T helper cells fromperipheralblood blood
14 chr3:111852600-111857600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:111852800-111856600 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr3:111853000-111856200 Weak transcription Primary monocytes fromperipheralblood blood
17 chr3:111853000-111856400 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr3:111853200-111856200 Enhancers Primary T cells from cord blood blood
19 chr3:111853200-111857000 Enhancers Stomach Mucosa stomach
20 chr3:111853400-111867400 Weak transcription Gastric stomach
21 chr3:111853600-111856400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:111853600-111857000 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr3:111853800-111857000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr3:111854200-111856400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr3:111854200-111856800 Weak transcription Fetal Intestine Small intestine
26 chr3:111854200-111857000 Enhancers Primary T helper cells PMA-I stimulated --
27 chr3:111854600-111856400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:111854600-111857000 Enhancers HUES48 Cell Line embryonic stem cell
29 chr3:111854600-111858000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr3:111854800-111856200 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:111854800-111857600 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr3:111854800-111857800 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr3:111855000-111857400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr3:111855000-111857600 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr3:111855000-111858000 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr3:111855200-111858000 Enhancers HUES64 Cell Line embryonic stem cell
37 chr3:111855400-111856800 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr3:111855400-111857000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr3:111855400-111857600 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr3:111855400-111858000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr3:111855600-111856000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr3:111855600-111856200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr3:111855600-111856200 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr3:111855600-111856200 Enhancers Brain Cingulate Gyrus brain
45 chr3:111855600-111856400 Enhancers Brain Angular Gyrus brain
46 chr3:111855600-111856600 Enhancers Brain Substantia Nigra brain
47 chr3:111855600-111857000 Enhancers Primary hematopoietic stem cells blood
48 chr3:111855800-111856000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr3:111855800-111856000 Enhancers H9 Cell Line embryonic stem cell
50 chr3:111855800-111856000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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