The 2.0 version of rSNPBase

Variant report

Variant rs6776494
Chromosome Location chr3:111813854-111813855
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111806000-111821600 Weak transcription Lung lung
2 chr3:111806800-111816400 Weak transcription Aorta Aorta
3 chr3:111807000-111816200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:111807400-111814200 Weak transcription A549 lung
5 chr3:111810200-111814200 Weak transcription Hela-S3 cervix
6 chr3:111810200-111815600 Weak transcription HUVEC blood vessel
7 chr3:111810400-111852000 Weak transcription Esophagus oesophagus
8 chr3:111812000-111814000 Weak transcription Placenta Amnion Placenta Amnion
9 chr3:111812000-111814000 Strong transcription NHEK skin
10 chr3:111812000-111814800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:111812000-111816000 Weak transcription NHLF lung
12 chr3:111812000-111816200 Weak transcription GM12878-XiMat blood
13 chr3:111812000-111825000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:111812000-111844000 Weak transcription Colonic Mucosa Colon
15 chr3:111812000-111845600 Weak transcription Duodenum Mucosa Duodenum
16 chr3:111812200-111814000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr3:111812200-111814000 Weak transcription NH-A brain
18 chr3:111812200-111815000 Weak transcription Fetal Intestine Large intestine
19 chr3:111812200-111815400 Weak transcription HMEC breast
20 chr3:111812200-111815800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:111812200-111816000 Weak transcription Muscle Satellite Cultured Cells --
22 chr3:111812200-111816400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr3:111812200-111820200 Weak transcription Gastric stomach
24 chr3:111812200-111820200 Weak transcription Thymus Thymus
25 chr3:111812200-111828000 Weak transcription Left Ventricle heart
26 chr3:111812200-111853000 Weak transcription Right Ventricle heart
27 chr3:111812400-111814400 Enhancers Fetal Heart heart
28 chr3:111812400-111814400 Strong transcription Fetal Thymus thymus
29 chr3:111812400-111814400 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr3:111812400-111814800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr3:111812400-111815000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr3:111812400-111816000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr3:111812400-111816200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:111812400-111816200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:111812400-111816200 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr3:111812400-111816200 Weak transcription HSMM muscle
37 chr3:111812400-111816600 Weak transcription HSMMtube muscle
38 chr3:111812400-111820400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr3:111812400-111820600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr3:111812400-111820800 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr3:111812400-111821400 Weak transcription Primary B cells from cord blood blood
42 chr3:111812400-111822000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr3:111812400-111824800 Weak transcription Primary T cells from cord blood blood
44 chr3:111812400-111832000 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr3:111812400-111835800 Weak transcription H9 Cell Line embryonic stem cell
46 chr3:111812600-111814600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:111812600-111814800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:111812600-111816000 Weak transcription Osteobl bone
49 chr3:111812600-111821800 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr3:111812600-111828000 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015