The 2.0 version of rSNPBase

Variant report

Variant rs6809741
Chromosome Location chr3:111828902-111828903
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111810400-111852000 Weak transcription Esophagus oesophagus
2 chr3:111812000-111844000 Weak transcription Colonic Mucosa Colon
3 chr3:111812000-111845600 Weak transcription Duodenum Mucosa Duodenum
4 chr3:111812200-111853000 Weak transcription Right Ventricle heart
5 chr3:111812400-111832000 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr3:111812400-111835800 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:111812600-111840200 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr3:111814400-111836000 Weak transcription Rectal Smooth Muscle rectum
9 chr3:111817200-111831400 Weak transcription Hela-S3 cervix
10 chr3:111817200-111833600 Weak transcription HSMMtube muscle
11 chr3:111819000-111840400 Weak transcription Fetal Stomach stomach
12 chr3:111819600-111847800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr3:111821000-111831800 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr3:111821000-111835800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:111821200-111830400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr3:111821200-111832000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr3:111821200-111833800 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr3:111821200-111833800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr3:111821200-111834000 Weak transcription HSMM muscle
20 chr3:111821200-111843600 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr3:111821400-111839000 Weak transcription Osteobl bone
22 chr3:111821400-111843600 Weak transcription Muscle Satellite Cultured Cells --
23 chr3:111821600-111830000 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr3:111821600-111834800 Weak transcription HUVEC blood vessel
25 chr3:111822000-111844600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr3:111822400-111839200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr3:111822600-111833600 Weak transcription Fetal Intestine Small intestine
28 chr3:111822800-111835600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr3:111823000-111831600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:111823000-111834400 Weak transcription A549 lung
31 chr3:111823400-111837800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:111824800-111829600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr3:111825600-111833600 Weak transcription Placenta Amnion Placenta Amnion
34 chr3:111825600-111838600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr3:111825800-111829600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr3:111825800-111829800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:111825800-111830000 Weak transcription Pancreas Pancrea
38 chr3:111825800-111832000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr3:111825800-111835400 Weak transcription Aorta Aorta
40 chr3:111825800-111835600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr3:111825800-111844400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:111826000-111833800 Weak transcription Primary T cells from cord blood blood
43 chr3:111826600-111830200 Strong transcription Fetal Thymus thymus
44 chr3:111826800-111831200 Weak transcription HMEC breast
45 chr3:111826800-111831400 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr3:111827000-111838600 Weak transcription Spleen Spleen
47 chr3:111827400-111831000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr3:111827800-111830200 Strong transcription Thymus Thymus
49 chr3:111828000-111833200 Strong transcription NH-A brain
50 chr3:111828200-111838600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015