The 2.0 version of rSNPBase

Variant report

Variant rs73853307
Chromosome Location chr3:111840261-111840262
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111810400-111852000 Weak transcription Esophagus oesophagus
2 chr3:111812000-111844000 Weak transcription Colonic Mucosa Colon
3 chr3:111812000-111845600 Weak transcription Duodenum Mucosa Duodenum
4 chr3:111812200-111853000 Weak transcription Right Ventricle heart
5 chr3:111819000-111840400 Weak transcription Fetal Stomach stomach
6 chr3:111819600-111847800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:111821200-111843600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr3:111821400-111843600 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:111822000-111844600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr3:111825800-111844400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:111830600-111853200 Weak transcription Lung lung
12 chr3:111830800-111845400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:111831400-111843000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr3:111832000-111844600 Weak transcription Hela-S3 cervix
15 chr3:111832400-111840600 Enhancers Primary B cells from cord blood blood
16 chr3:111832600-111841600 Enhancers Primary B cells from peripheral blood blood
17 chr3:111833200-111844000 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr3:111834200-111853800 Weak transcription Fetal Intestine Small intestine
19 chr3:111834400-111848000 Weak transcription Placenta Amnion Placenta Amnion
20 chr3:111834600-111841600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:111835200-111840800 Strong transcription NH-A brain
22 chr3:111835800-111840600 Enhancers Primary monocytes fromperipheralblood blood
23 chr3:111835800-111841000 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr3:111835800-111844400 Weak transcription Fetal Heart heart
25 chr3:111835800-111849600 Weak transcription Small Intestine intestine
26 chr3:111836000-111841200 Enhancers Primary hematopoietic stem cells blood
27 chr3:111836200-111840800 Enhancers Monocytes-CD14+_RO01746 blood
28 chr3:111836200-111843600 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr3:111836200-111844200 Weak transcription H1 Cell Line embryonic stem cell
30 chr3:111836200-111845000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:111836200-111849200 Weak transcription Aorta Aorta
32 chr3:111836600-111846400 Weak transcription H9 Cell Line embryonic stem cell
33 chr3:111837000-111840800 Enhancers Primary T helper cells fromperipheralblood blood
34 chr3:111837400-111841200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr3:111837800-111842200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:111838000-111840600 Strong transcription NHEK skin
37 chr3:111838200-111840800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr3:111838200-111840800 Genic enhancers Fetal Thymus thymus
39 chr3:111838400-111845400 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr3:111838600-111840400 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr3:111838600-111840400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr3:111838600-111840600 Enhancers Primary T cells fromperipheralblood blood
43 chr3:111838600-111840800 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr3:111838600-111842000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr3:111838800-111840800 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr3:111838800-111843800 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr3:111838800-111844400 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr3:111838800-111845400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr3:111839000-111843600 Weak transcription Fetal Muscle Leg muscle
50 chr3:111839000-111843800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015