The 2.0 version of rSNPBase

Variant report

Variant rs56127415
Chromosome Location chr3:111815145-111815146
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111806000-111821600 Weak transcription Lung lung
2 chr3:111806800-111816400 Weak transcription Aorta Aorta
3 chr3:111807000-111816200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:111810200-111815600 Weak transcription HUVEC blood vessel
5 chr3:111810400-111852000 Weak transcription Esophagus oesophagus
6 chr3:111812000-111816000 Weak transcription NHLF lung
7 chr3:111812000-111816200 Weak transcription GM12878-XiMat blood
8 chr3:111812000-111825000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:111812000-111844000 Weak transcription Colonic Mucosa Colon
10 chr3:111812000-111845600 Weak transcription Duodenum Mucosa Duodenum
11 chr3:111812200-111815400 Weak transcription HMEC breast
12 chr3:111812200-111815800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:111812200-111816000 Weak transcription Muscle Satellite Cultured Cells --
14 chr3:111812200-111816400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:111812200-111820200 Weak transcription Gastric stomach
16 chr3:111812200-111820200 Weak transcription Thymus Thymus
17 chr3:111812200-111828000 Weak transcription Left Ventricle heart
18 chr3:111812200-111853000 Weak transcription Right Ventricle heart
19 chr3:111812400-111816000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:111812400-111816200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr3:111812400-111816200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:111812400-111816200 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr3:111812400-111816200 Weak transcription HSMM muscle
24 chr3:111812400-111816600 Weak transcription HSMMtube muscle
25 chr3:111812400-111820400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr3:111812400-111820600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:111812400-111820800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr3:111812400-111821400 Weak transcription Primary B cells from cord blood blood
29 chr3:111812400-111822000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr3:111812400-111824800 Weak transcription Primary T cells from cord blood blood
31 chr3:111812400-111832000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr3:111812400-111835800 Weak transcription H9 Cell Line embryonic stem cell
33 chr3:111812600-111816000 Weak transcription Osteobl bone
34 chr3:111812600-111821800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr3:111812600-111828000 Weak transcription H1 Cell Line embryonic stem cell
36 chr3:111812600-111840200 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr3:111813600-111815200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr3:111813800-111815200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr3:111814000-111815400 Genic enhancers NH-A brain
40 chr3:111814000-111817400 Enhancers Placenta Amnion Placenta Amnion
41 chr3:111814200-111815600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:111814200-111816600 Enhancers A549 lung
43 chr3:111814200-111817200 Enhancers Hela-S3 cervix
44 chr3:111814200-111820200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr3:111814200-111820600 Weak transcription Pancreas Pancrea
46 chr3:111814400-111816000 Weak transcription Stomach Mucosa stomach
47 chr3:111814400-111817200 Enhancers Rectal Mucosa Donor 31 rectum
48 chr3:111814400-111820400 Weak transcription Fetal Thymus thymus
49 chr3:111814400-111836000 Weak transcription Rectal Smooth Muscle rectum
50 chr3:111814600-111815200 ZNF genes & repeats Placenta Placenta

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Last update: Aug 31, 2015