The 2.0 version of rSNPBase

Variant report

Variant rs73853321
Chromosome Location chr3:111853976-111853977
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111840800-111855800 Weak transcription NH-A brain
2 chr3:111844800-111855800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:111845600-111855800 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:111848200-111857000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr3:111848400-111854600 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr3:111848400-111854800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr3:111848400-111855800 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:111848400-111856000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr3:111848400-111856800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:111848800-111854200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr3:111849000-111854800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr3:111849200-111855000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr3:111851600-111854600 Enhancers Primary hematopoietic stem cells blood
14 chr3:111852200-111854200 Enhancers Sigmoid Colon Sigmoid Colon
15 chr3:111852200-111855000 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr3:111852200-111855200 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr3:111852200-111857000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr3:111852200-111857600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:111852200-111863400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:111852400-111854600 Enhancers Primary T cells fromperipheralblood blood
21 chr3:111852400-111855200 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr3:111852400-111856200 Enhancers Fetal Thymus thymus
23 chr3:111852400-111856200 Enhancers Thymus Thymus
24 chr3:111852400-111856600 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr3:111852400-111856600 Flanking Active TSS GM12878-XiMat blood
26 chr3:111852400-111857000 Enhancers Primary B cells from cord blood blood
27 chr3:111852400-111857200 Enhancers Primary B cells from peripheral blood blood
28 chr3:111852600-111854000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr3:111852600-111855000 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr3:111852600-111856600 Enhancers Primary T helper cells fromperipheralblood blood
31 chr3:111852600-111857600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:111852800-111856600 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr3:111853000-111854200 Enhancers Hela-S3 cervix
34 chr3:111853000-111856200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr3:111853000-111856400 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr3:111853200-111854000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:111853200-111854200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr3:111853200-111854200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr3:111853200-111854400 Enhancers Fetal Heart heart
40 chr3:111853200-111856200 Enhancers Primary T cells from cord blood blood
41 chr3:111853200-111857000 Enhancers Stomach Mucosa stomach
42 chr3:111853400-111854000 Weak transcription Duodenum Mucosa Duodenum
43 chr3:111853400-111854200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr3:111853400-111855800 Weak transcription Left Ventricle heart
45 chr3:111853400-111867400 Weak transcription Gastric stomach
46 chr3:111853600-111854400 Enhancers HUES64 Cell Line embryonic stem cell
47 chr3:111853600-111856400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
48 chr3:111853600-111857000 Enhancers Primary T helper naive cells fromperipheralblood blood
49 chr3:111853800-111854200 Enhancers Fetal Intestine Small intestine
50 chr3:111853800-111854600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015