Variant report

Variant	rs7644889
Chromosome Location	chr3:111726018-111726019
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:111714617..111717227-chr3:111724374..111726651,2	K562	blood:
2	chr3:111693612..111696136-chr3:111725094..111727376,2	K562	blood:
3	chr3:111719763..111722157-chr3:111725252..111728170,3	MCF-7	breast:
4	chr3:111725243..111727215-chr3:111731886..111733831,2	K562	blood:

rs_ID	r²[population]
rs1039309	1.00[AMR][1000 genomes]
rs10755070	1.00[AMR][1000 genomes]
rs11920568	1.00[AMR][1000 genomes]
rs12171297	1.00[AMR][1000 genomes]
rs1282969	1.00[AMR][1000 genomes]
rs1282971	1.00[AMR][1000 genomes]
rs1295993	1.00[CEU][hapmap]
rs1352888	1.00[AMR][1000 genomes]
rs1463875	1.00[AMR][1000 genomes]
rs1553226	1.00[AMR][1000 genomes]
rs168151	1.00[CEU][hapmap]
rs16858901	1.00[CEU][hapmap]
rs2055363	1.00[AMR][1000 genomes]
rs4682064	1.00[AMR][1000 genomes]
rs6438029	1.00[CEU][hapmap]
rs6438030	1.00[CEU][hapmap]
rs6765246	1.00[CEU][hapmap]
rs6765524	1.00[CEU][hapmap]
rs6770127	1.00[CEU][hapmap]
rs6774728	1.00[CEU][hapmap]
rs6787297	1.00[CEU][hapmap]
rs6794944	1.00[CEU][hapmap]
rs6803308	1.00[EUR][1000 genomes]
rs6806972	1.00[CEU][hapmap]
rs7340688	1.00[AMR][1000 genomes]
rs7616227	1.00[AMR][1000 genomes]
rs774859	1.00[CEU][hapmap]
rs8179903	1.00[AMR][1000 genomes]
rs937555	1.00[AMR][1000 genomes]
rs937556	1.00[AMR][1000 genomes]
rs937558	1.00[AMR][1000 genomes]

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:111718400-111726400	Weak transcription	Aorta	Aorta
2	chr3:111718400-111730000	Weak transcription	Gastric	stomach
3	chr3:111718400-111732200	Weak transcription	Lung	lung
4	chr3:111718800-111726400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr3:111719000-111729800	Weak transcription	Right Ventricle	heart
6	chr3:111720000-111727800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr3:111720200-111752800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr3:111720600-111730600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr3:111720800-111729800	Weak transcription	Brain Anterior Caudate	brain
10	chr3:111720800-111732200	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr3:111721800-111726600	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr3:111721800-111732200	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr3:111722000-111726600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:111722000-111732200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr3:111722200-111726600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr3:111722400-111726400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr3:111722600-111732600	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr3:111722800-111729800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr3:111723000-111732200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr3:111723000-111732200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr3:111723200-111727800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr3:111723400-111730000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr3:111723800-111726200	Weak transcription	Fetal Brain Male	brain
24	chr3:111724000-111726600	Weak transcription	Liver	Liver
25	chr3:111724000-111729200	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr3:111724000-111732000	Weak transcription	Fetal Intestine Small	intestine
27	chr3:111724200-111726200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr3:111724200-111728400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr3:111724400-111726200	Weak transcription	Osteobl	bone
30	chr3:111724400-111726600	Weak transcription	NHEK	skin
31	chr3:111724400-111729400	Weak transcription	Brain Angular Gyrus	brain
32	chr3:111724400-111729800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr3:111724400-111732000	Weak transcription	Fetal Intestine Large	intestine
34	chr3:111724400-111734200	Weak transcription	NH-A	brain
35	chr3:111724600-111726200	Weak transcription	HMEC	breast
36	chr3:111724600-111726600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr3:111724600-111734400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr3:111725000-111728000	Genic enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr3:111725000-111728600	Enhancers	Fetal Lung	lung
40	chr3:111725200-111727200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr3:111725400-111727600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr3:111725600-111726600	Genic enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr3:111725600-111726600	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr3:111725800-111726600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr3:111725800-111726600	Genic enhancers	Fetal Brain Female	brain
46	chr3:111726000-111726200	Genic enhancers	Brain Germinal Matrix	brain

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