Variant report
| Variant | rs7774175 |
|---|---|
| Chromosome Location | chr6:144676020-144676021 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:144653200-144684600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr6:144663200-144685800 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr6:144665400-144696400 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr6:144668800-144681600 | Weak transcription | Small Intestine | intestine |
| 5 | chr6:144670800-144691200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr6:144671000-144681600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr6:144671000-144683200 | Weak transcription | Gastric | stomach |
| 8 | chr6:144671200-144692000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr6:144671400-144681600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr6:144671400-144681600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr6:144671800-144681600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 12 | chr6:144671800-144683200 | Weak transcription | HSMM | muscle |
| 13 | chr6:144671800-144685200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 14 | chr6:144672000-144683200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 15 | chr6:144672200-144676200 | Flanking Active TSS | GM12878-XiMat | blood |
| 16 | chr6:144673000-144681400 | Weak transcription | Esophagus | oesophagus |
| 17 | chr6:144673200-144676200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 18 | chr6:144673200-144677800 | Weak transcription | Pancreas | Pancrea |
| 19 | chr6:144673200-144678400 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 20 | chr6:144673200-144679800 | Weak transcription | Ovary | ovary |
| 21 | chr6:144673200-144681400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr6:144673200-144683000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr6:144673200-144683200 | Weak transcription | Liver | Liver |
| 24 | chr6:144673200-144683200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr6:144673400-144678800 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 26 | chr6:144673400-144678800 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 27 | chr6:144673400-144681400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr6:144673400-144681400 | Weak transcription | NHEK | skin |
| 29 | chr6:144673400-144681600 | Weak transcription | Right Atrium | heart |
| 30 | chr6:144673400-144683200 | Weak transcription | Stomach Mucosa | stomach |
| 31 | chr6:144673400-144683400 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr6:144673400-144699600 | Weak transcription | Fetal Stomach | stomach |
| 33 | chr6:144673800-144676800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 34 | chr6:144673800-144678000 | Enhancers | Primary T cells from cord blood | blood |
| 35 | chr6:144673800-144681600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr6:144673800-144682800 | Weak transcription | Fetal Muscle Leg | muscle |
| 37 | chr6:144674200-144676600 | Enhancers | Primary B cells from cord blood | blood |
| 38 | chr6:144674200-144680200 | Weak transcription | HUVEC | blood vessel |
| 39 | chr6:144674200-144680600 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 40 | chr6:144674200-144681600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 41 | chr6:144674200-144683400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 42 | chr6:144674800-144676200 | Genic enhancers | Primary B cells from peripheral blood | blood |
| 43 | chr6:144674800-144676600 | Enhancers | Left Ventricle | heart |
| 44 | chr6:144675200-144676200 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr6:144675400-144676600 | Enhancers | Spleen | Spleen |
| 46 | chr6:144675400-144680200 | Weak transcription | Fetal Heart | heart |
| 47 | chr6:144675400-144681400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 48 | chr6:144675400-144685600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 49 | chr6:144675600-144676800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 50 | chr6:144675600-144681600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
