The 2.0 version of rSNPBase

Variant report

Variant rs73589002
Chromosome Location chr6:144645617-144645618
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144616400-144648000 Weak transcription NHEK skin
2 chr6:144624400-144648000 Weak transcription HMEC breast
3 chr6:144627600-144645800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:144630200-144648400 Weak transcription Placenta Amnion Placenta Amnion
5 chr6:144630600-144648200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:144635000-144651000 Weak transcription Small Intestine intestine
7 chr6:144635600-144650800 Weak transcription Aorta Aorta
8 chr6:144636000-144656200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:144636600-144648000 Weak transcription Brain Anterior Caudate brain
10 chr6:144636600-144654800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:144636800-144650800 Weak transcription Stomach Smooth Muscle stomach
12 chr6:144636800-144654800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:144636800-144656400 Weak transcription Brain Substantia Nigra brain
14 chr6:144637000-144647600 Weak transcription Fetal Muscle Leg muscle
15 chr6:144637000-144651800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr6:144637200-144647800 Weak transcription Left Ventricle heart
17 chr6:144637200-144647800 Weak transcription Right Atrium heart
18 chr6:144637200-144648000 Weak transcription Psoas Muscle Psoas
19 chr6:144637400-144647800 Weak transcription Fetal Stomach stomach
20 chr6:144637400-144648400 Weak transcription Fetal Muscle Trunk muscle
21 chr6:144637600-144647800 Weak transcription Right Ventricle heart
22 chr6:144639600-144660200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:144641200-144648000 Weak transcription Lung lung
24 chr6:144642200-144646200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:144642200-144646400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:144642200-144647600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr6:144642200-144647600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr6:144642200-144654800 Weak transcription Primary hematopoietic stem cells blood
29 chr6:144642200-144655200 Weak transcription Thymus Thymus
30 chr6:144642200-144659800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:144642400-144646000 Weak transcription Adipose Nuclei Adipose
32 chr6:144642600-144647200 Weak transcription Fetal Heart heart
33 chr6:144642600-144648000 Weak transcription Fetal Lung lung
34 chr6:144642600-144649200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr6:144643000-144646600 Enhancers Stomach Mucosa stomach
36 chr6:144643200-144651600 Enhancers HUES64 Cell Line embryonic stem cell
37 chr6:144643600-144646200 Weak transcription Pancreas Pancrea
38 chr6:144643600-144648000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr6:144643600-144648000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr6:144643600-144648000 Weak transcription Gastric stomach
41 chr6:144643600-144648000 Weak transcription NHLF lung
42 chr6:144643600-144648200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:144643600-144651200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr6:144643600-144652600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:144643600-144656400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr6:144643800-144647800 Weak transcription Ovary ovary
47 chr6:144643800-144648000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr6:144643800-144648000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:144643800-144652000 Weak transcription HSMM muscle
50 chr6:144643800-144663000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015