The 2.0 version of rSNPBase

Variant report

Variant rs17073498
Chromosome Location chr6:144507910-144507911
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144473400-144513800 Weak transcription Primary T cells from cord blood blood
2 chr6:144479000-144511800 Weak transcription Psoas Muscle Psoas
3 chr6:144480200-144508200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:144488800-144510000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:144489400-144508200 Weak transcription Liver Liver
6 chr6:144497400-144508600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:144499600-144511000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr6:144500800-144508000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr6:144500800-144518800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr6:144501200-144508400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:144501200-144520000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr6:144501400-144512400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr6:144501600-144508200 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr6:144501600-144519400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr6:144502600-144509600 Weak transcription Primary B cells from cord blood blood
16 chr6:144504000-144511800 Weak transcription Right Atrium heart
17 chr6:144505400-144512000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr6:144505600-144511400 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr6:144506200-144508000 Weak transcription Aorta Aorta
20 chr6:144506200-144508000 Weak transcription NHLF lung
21 chr6:144506200-144515600 Weak transcription Fetal Heart heart
22 chr6:144506600-144517000 Weak transcription Colon Smooth Muscle Colon
23 chr6:144507000-144512200 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr6:144507200-144508000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:144507200-144511400 Weak transcription Muscle Satellite Cultured Cells --
26 chr6:144507600-144508000 Weak transcription Colonic Mucosa Colon
27 chr6:144507600-144508800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
28 chr6:144507600-144509000 ZNF genes & repeats GM12878-XiMat blood
29 chr6:144507600-144509200 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr6:144507600-144509800 Strong transcription Primary T cells fromperipheralblood blood
31 chr6:144507800-144508000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:144507800-144508200 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
33 chr6:144507800-144508400 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr6:144507800-144508400 ZNF genes & repeats Fetal Muscle Leg muscle
35 chr6:144507800-144508600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:144507800-144508600 ZNF genes & repeats Placenta Placenta
37 chr6:144507800-144508600 ZNF genes & repeats Thymus Thymus
38 chr6:144507800-144508800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr6:144507800-144508800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:144507800-144508800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:144507800-144508800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:144507800-144508800 ZNF genes & repeats Gastric stomach
43 chr6:144507800-144508800 ZNF genes & repeats Lung lung
44 chr6:144507800-144509000 Strong transcription Primary B cells from peripheral blood blood
45 chr6:144507800-144509000 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr6:144507800-144509000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr6:144507800-144509000 Strong transcription Duodenum Mucosa Duodenum
48 chr6:144507800-144509000 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr6:144507800-144509000 ZNF genes & repeats Esophagus oesophagus
50 chr6:144507800-144509000 Strong transcription Left Ventricle heart

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Last update: Aug 31, 2015