Variant report

Variant	rs7777332
Chromosome Location	chr7:33468380-33468381
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10251272	0.83[GIH][hapmap]
rs10258040	0.97[ASN][1000 genomes]
rs10951388	0.95[CEU][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12666246	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12666395	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12668181	0.92[ASN][1000 genomes]
rs12668971	1.00[ASW][hapmap];1.00[CEU][hapmap];0.80[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12670765	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12673354	0.83[GIH][hapmap]
rs12674317	0.94[ASN][1000 genomes]
rs1419920	0.89[ASN][1000 genomes]
rs1419926	0.90[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17475728	0.83[GIH][hapmap]
rs17725162	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2041418	0.89[ASN][1000 genomes]
rs2159585	0.82[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs35173250	0.97[ASN][1000 genomes]
rs3779241	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4341064	0.85[ASN][1000 genomes]
rs57736066	0.92[ASN][1000 genomes]
rs59066744	0.82[ASN][1000 genomes]
rs60902947	0.97[ASN][1000 genomes]
rs6462470	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs6462473	0.82[CEU][hapmap]
rs6462478	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6952538	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs6960094	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6962002	0.88[ASN][1000 genomes]
rs6970919	0.94[ASN][1000 genomes]
rs6973093	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6979138	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7777122	0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7806498	1.00[JPT][hapmap];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606610	chr7:33218763-33486316	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1016416	chr7:33241443-33559477	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv916660	chr7:33272493-33506384	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv830944	chr7:33389892-33549882	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:33454800-33476800	Weak transcription	Aorta	Aorta
2	chr7:33463000-33476800	Weak transcription	Psoas Muscle	Psoas
3	chr7:33465600-33472600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr7:33468000-33468400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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