Variant report

Variant	rs7791239
Chromosome Location	chr7:136529079-136529080
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13247260	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1364493	0.91[CHB][hapmap]
rs1364494	0.89[CHB][hapmap]
rs1424553	0.84[ASN][1000 genomes]
rs1424569	1.00[CHB][hapmap];0.84[JPT][hapmap]
rs17168768	0.84[ASN][1000 genomes]
rs2113550	0.91[CHB][hapmap]
rs28578872	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs3735028	0.91[CHB][hapmap];0.84[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv971220	chr7:136508557-136535847	Active TSS Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
3	esv1848748	chr7:136512449-136534763	Active TSS Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136529000-136529600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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