Variant report

Variant	rs7796504
Chromosome Location	chr7:136426247-136426248
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10277548	0.85[ASN][1000 genomes]
rs10954541	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10954542	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11762747	0.84[ASN][1000 genomes]
rs11975460	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4397326	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4434546	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs62485168	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6467680	0.85[ASN][1000 genomes]
rs6962503	0.81[ASN][1000 genomes]
rs7796493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3374876	chr7:136413245-136480051	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136425600-136426800	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:136425800-136428000	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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