Variant report
Variant | rs10277548 |
---|---|
Chromosome Location | chr7:136381248-136381249 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10238281 | 0.85[ASN][1000 genomes] |
rs10259281 | 0.90[ASN][1000 genomes] |
rs10464719 | 0.82[ASN][1000 genomes] |
rs10954541 | 0.98[ASN][1000 genomes] |
rs10954542 | 0.85[ASN][1000 genomes] |
rs11762747 | 0.92[ASN][1000 genomes] |
rs11975460 | 0.97[ASN][1000 genomes] |
rs1806271 | 0.81[ASN][1000 genomes] |
rs34910057 | 0.87[ASN][1000 genomes] |
rs4397326 | 0.96[ASN][1000 genomes] |
rs4434546 | 0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4574788 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs4599752 | 0.87[ASN][1000 genomes] |
rs62485168 | 0.97[ASN][1000 genomes] |
rs6467680 | 0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6952288 | 0.86[ASN][1000 genomes] |
rs6962503 | 0.95[ASN][1000 genomes] |
rs7787141 | 0.88[ASN][1000 genomes] |
rs7796493 | 0.85[ASN][1000 genomes] |
rs7796504 | 0.85[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv518439 | chr7:136134265-136452082 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
2 | nsv508484 | chr7:136333249-136384790 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:136377400-136381600 | Weak transcription | Fetal Heart | heart |