Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:136090648..136091291-chr7:136372401..136373004,2	MCF-7	breast:
2	chr7:135485495..135485999-chr7:136372640..136373174,2	MCF-7	breast:
3	chr7:136090684..136091633-chr7:136372247..136373374,4	MCF-7	breast:
4	chr7:136372346..136372966-chr7:137276780..137277565,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10238281	0.83[ASN][1000 genomes]
rs10259281	0.89[ASN][1000 genomes]
rs10277548	0.97[ASN][1000 genomes]
rs10464719	0.82[ASN][1000 genomes]
rs10954541	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10954542	0.86[ASN][1000 genomes]
rs11762747	0.95[ASN][1000 genomes]
rs1806271	0.84[ASN][1000 genomes]
rs34910057	0.86[ASN][1000 genomes]
rs4397326	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4434546	0.96[ASN][1000 genomes]
rs4574788	0.86[ASN][1000 genomes]
rs4599752	0.86[ASN][1000 genomes]
rs62485168	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6467680	0.97[ASN][1000 genomes]
rs6952288	0.87[ASN][1000 genomes]
rs6962503	0.94[ASN][1000 genomes]
rs6965638	0.81[ASN][1000 genomes]
rs7787141	0.87[ASN][1000 genomes]
rs7796493	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7796504	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv508484	chr7:136333249-136384790	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136370800-136377000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:136371000-136373400	Weak transcription	Colon Smooth Muscle	Colon
3	chr7:136371000-136376000	Weak transcription	Brain Germinal Matrix	brain
4	chr7:136372600-136373600	Weak transcription	Fetal Heart	heart

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