The 2.0 version of rSNPBase

Variant report

Variant rs7798647
Chromosome Location chr7:22235889-22235890
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:22184600-22240600 Weak transcription Colonic Mucosa Colon
2 chr7:22214400-22247400 Weak transcription HUVEC blood vessel
3 chr7:22223200-22242600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr7:22225400-22253600 Weak transcription Stomach Mucosa stomach
5 chr7:22225800-22246800 Strong transcription Dnd41 blood
6 chr7:22227000-22236800 Strong transcription Rectal Mucosa Donor 31 rectum
7 chr7:22227400-22245600 Strong transcription HepG2 liver
8 chr7:22230400-22243000 Weak transcription Gastric stomach
9 chr7:22233400-22247600 Weak transcription Psoas Muscle Psoas
10 chr7:22233400-22259200 Weak transcription Rectal Smooth Muscle rectum
11 chr7:22233600-22236600 Weak transcription Fetal Intestine Small intestine
12 chr7:22233600-22236600 Weak transcription Lung lung
13 chr7:22233600-22238400 Weak transcription Duodenum Mucosa Duodenum
14 chr7:22233600-22238400 Weak transcription Spleen Spleen
15 chr7:22233600-22238800 Weak transcription Pancreas Pancrea
16 chr7:22233600-22240600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr7:22233600-22240800 Weak transcription Right Atrium heart
18 chr7:22233600-22241400 Weak transcription Aorta Aorta
19 chr7:22233600-22242800 Weak transcription Thymus Thymus
20 chr7:22233600-22247600 Weak transcription Right Ventricle heart
21 chr7:22233600-22253600 Weak transcription Esophagus oesophagus
22 chr7:22233600-22257000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr7:22233800-22236400 Enhancers Brain Substantia Nigra brain
24 chr7:22233800-22237200 Weak transcription H9 Cell Line embryonic stem cell
25 chr7:22233800-22239400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr7:22233800-22240600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr7:22233800-22242600 Weak transcription Liver Liver
28 chr7:22233800-22244000 Weak transcription NHEK skin
29 chr7:22233800-22247400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr7:22233800-22247400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr7:22234200-22240600 Strong transcription Fetal Thymus thymus
32 chr7:22234600-22236200 Enhancers Brain Inferior Temporal Lobe brain
33 chr7:22234600-22236800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr7:22234800-22236000 Enhancers Brain Anterior Caudate brain
35 chr7:22234800-22236000 Enhancers Brain Hippocampus Middle brain
36 chr7:22234800-22236800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr7:22234800-22238400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr7:22235000-22239600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr7:22235000-22240600 Weak transcription Brain Angular Gyrus brain
40 chr7:22235000-22240600 Weak transcription Fetal Kidney kidney
41 chr7:22235400-22236800 Strong transcription Primary B cells from cord blood blood
42 chr7:22235400-22240600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr7:22235400-22240600 Weak transcription Fetal Intestine Large intestine
44 chr7:22235600-22236200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:22235600-22239400 Weak transcription Brain Cingulate Gyrus brain
46 chr7:22235600-22253800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr7:22235600-22260600 Weak transcription GM12878-XiMat blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015