Variant report

Variant	rs7806536
Chromosome Location	chr7:98797083-98797084
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13224433	1.00[YRI][hapmap]
rs13239506	1.00[YRI][hapmap]
rs13239596	1.00[YRI][hapmap]
rs17161596	1.00[AMR][1000 genomes]
rs2008424	1.00[AMR][1000 genomes]
rs41417549	1.00[AMR][1000 genomes]
rs60470212	1.00[AMR][1000 genomes]
rs60686896	1.00[AMR][1000 genomes]
rs61099450	1.00[AMR][1000 genomes]
rs61147937	1.00[AMR][1000 genomes]
rs61239848	1.00[AMR][1000 genomes]
rs61742315	1.00[AMR][1000 genomes]
rs6942400	1.00[AMR][1000 genomes]
rs73401318	1.00[AMR][1000 genomes]
rs73401319	1.00[AMR][1000 genomes]
rs73401334	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73403115	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73403124	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73405119	1.00[AMR][1000 genomes]
rs73407298	1.00[AMR][1000 genomes]
rs73407301	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755119	chr7:98721885-98800145	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	15 gene(s)	inside rSNPs	diseases
2	esv3433144	chr7:98777878-99060209	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:98792200-98803600	Weak transcription	Stomach Mucosa	stomach
2	chr7:98794800-98798000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:98794800-98798200	Weak transcription	Osteobl	bone
4	chr7:98794800-98798400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr7:98795000-98798000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr7:98795000-98798200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:98795800-98798200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr7:98796400-98797400	Weak transcription	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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