Variant report

Variant	rs7808346
Chromosome Location	chr7:112593072-112593073
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10231221	1.00[ASW][hapmap];0.90[LWK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs17159929	1.00[EUR][1000 genomes]
rs1718954	0.82[YRI][hapmap]
rs2197953	1.00[ASW][hapmap];0.89[YRI][hapmap]
rs2396584	0.84[AFR][1000 genomes]
rs4730565	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs501621	1.00[ASW][hapmap];1.00[YRI][hapmap]
rs551461	1.00[ASW][hapmap];1.00[YRI][hapmap]
rs589711	1.00[MEX][hapmap]
rs60112566	1.00[EUR][1000 genomes]
rs61617214	1.00[EUR][1000 genomes]
rs6950471	1.00[EUR][1000 genomes]
rs6960384	1.00[EUR][1000 genomes]
rs73436488	1.00[EUR][1000 genomes]
rs73436494	1.00[EUR][1000 genomes]
rs73436497	1.00[EUR][1000 genomes]
rs73436499	1.00[EUR][1000 genomes]
rs73438310	1.00[EUR][1000 genomes]
rs73438320	1.00[EUR][1000 genomes]
rs73438322	1.00[EUR][1000 genomes]
rs7784144	1.00[EUR][1000 genomes]
rs7799100	1.00[EUR][1000 genomes]
rs7801228	1.00[EUR][1000 genomes]
rs821784	1.00[ASW][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs821788	1.00[ASW][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758131	chr7:112492127-112768628	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv2759556	chr7:112492127-112768628	Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv3692941	chr7:112571420-112614215	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
4	nsv1027981	chr7:112577657-112613212	Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
5	nsv1020911	chr7:112581515-112615249	Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112581000-112593800	Weak transcription	Left Ventricle	heart

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