Variant report

Variant	rs7832532
Chromosome Location	chr8:111791365-111791366
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:111781609..111784016-chr8:111789603..111791637,2	MCF-7	breast:

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs11779888	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11783887	0.82[EUR][1000 genomes]
rs11786555	0.84[EUR][1000 genomes]
rs11988928	0.82[EUR][1000 genomes]
rs11990659	0.91[EUR][1000 genomes]
rs11990689	0.91[EUR][1000 genomes]
rs11994872	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11994876	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11994892	0.84[EUR][1000 genomes]
rs11994924	0.84[EUR][1000 genomes]
rs13268040	0.80[EUR][1000 genomes]
rs1489366	0.82[EUR][1000 genomes]
rs1489371	0.82[EUR][1000 genomes]
rs16881105	0.84[EUR][1000 genomes]
rs16881260	0.84[EUR][1000 genomes]
rs16881262	0.82[EUR][1000 genomes]
rs16881278	0.82[EUR][1000 genomes]
rs16881313	0.82[EUR][1000 genomes]
rs2351322	0.80[EUR][1000 genomes]
rs4335112	0.82[EUR][1000 genomes]
rs4351444	0.80[EUR][1000 genomes]
rs4398950	0.80[EUR][1000 genomes]
rs4607577	0.84[EUR][1000 genomes]
rs56249027	0.82[EUR][1000 genomes]
rs57214640	0.80[EUR][1000 genomes]
rs58289479	0.84[EUR][1000 genomes]
rs59688001	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6415454	0.80[EUR][1000 genomes]
rs6469323	0.84[EUR][1000 genomes]
rs6469326	0.82[EUR][1000 genomes]
rs6469329	0.82[EUR][1000 genomes]
rs6992712	0.84[EUR][1000 genomes]
rs6996166	0.80[EUR][1000 genomes]
rs7004409	0.82[EUR][1000 genomes]
rs7004898	0.82[EUR][1000 genomes]
rs7009162	0.84[EUR][1000 genomes]
rs73325303	0.82[EUR][1000 genomes]
rs73325320	0.82[EUR][1000 genomes]
rs73325322	0.82[EUR][1000 genomes]
rs73325323	0.82[EUR][1000 genomes]
rs73325364	0.82[EUR][1000 genomes]
rs73325366	0.82[EUR][1000 genomes]
rs73325385	0.80[EUR][1000 genomes]
rs73700740	0.82[EUR][1000 genomes]
rs73700745	0.82[EUR][1000 genomes]
rs73700751	0.82[EUR][1000 genomes]
rs73700784	0.82[EUR][1000 genomes]
rs73702342	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73702377	0.89[EUR][1000 genomes]
rs7387318	0.80[EUR][1000 genomes]
rs7387866	0.80[EUR][1000 genomes]
rs7461197	0.80[EUR][1000 genomes]
rs7812873	0.98[EUR][1000 genomes]
rs7829873	0.80[EUR][1000 genomes]
rs931411	0.80[EUR][1000 genomes]
rs931412	0.80[EUR][1000 genomes]
rs9649932	0.80[EUR][1000 genomes]
rs974684	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027659	chr8:111585843-111875753	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1025390	chr8:111605571-111806020	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv539718	chr8:111605571-111806020	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv831423	chr8:111672801-111869818	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv891293	chr8:111704563-111822043	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
6	nsv1031245	chr8:111716585-111875753	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv891294	chr8:111754075-112163801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
8	nsv1032766	chr8:111779352-111995438	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv1030494	chr8:111779352-112421812	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
10	nsv972596	chr8:111788240-111793793	Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:111788600-111826200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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