Variant report
Variant | rs2351322 |
---|---|
Chromosome Location | chr8:111905221-111905222 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10094433 | 0.95[EUR][1000 genomes] |
rs10106484 | 0.95[EUR][1000 genomes] |
rs10108172 | 0.95[EUR][1000 genomes] |
rs10108260 | 0.95[EUR][1000 genomes] |
rs10110044 | 0.95[EUR][1000 genomes] |
rs10112633 | 0.87[EUR][1000 genomes] |
rs10113059 | 0.91[EUR][1000 genomes] |
rs10808440 | 0.95[EUR][1000 genomes] |
rs10955554 | 0.95[EUR][1000 genomes] |
rs11779737 | 0.89[EUR][1000 genomes] |
rs11779888 | 0.80[EUR][1000 genomes] |
rs11783887 | 0.89[EUR][1000 genomes] |
rs11786555 | 0.95[EUR][1000 genomes] |
rs11988126 | 0.81[AFR][1000 genomes];0.98[EUR][1000 genomes] |
rs11988928 | 0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs11990659 | 0.89[EUR][1000 genomes] |
rs11990689 | 0.89[EUR][1000 genomes] |
rs11991405 | 0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs11994892 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs11994924 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs13268040 | 0.91[EUR][1000 genomes] |
rs13270913 | 0.95[EUR][1000 genomes] |
rs13271392 | 0.95[EUR][1000 genomes] |
rs13280135 | 0.95[EUR][1000 genomes] |
rs13280204 | 0.93[EUR][1000 genomes] |
rs13281673 | 0.95[EUR][1000 genomes] |
rs1387409 | 0.95[EUR][1000 genomes] |
rs1489354 | 0.95[EUR][1000 genomes] |
rs1489355 | 0.95[EUR][1000 genomes] |
rs1489366 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs1489371 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs1546013 | 0.80[AFR][1000 genomes];0.95[EUR][1000 genomes] |
rs16881105 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs16881260 | 0.95[EUR][1000 genomes] |
rs16881262 | 0.98[EUR][1000 genomes] |
rs16881278 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs16881313 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs4143847 | 0.95[EUR][1000 genomes] |
rs4335112 | 0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs4351440 | 0.95[EUR][1000 genomes] |
rs4351444 | 0.91[EUR][1000 genomes] |
rs4398950 | 0.91[EUR][1000 genomes] |
rs4448249 | 0.95[EUR][1000 genomes] |
rs4607577 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs4637866 | 0.95[EUR][1000 genomes] |
rs56249027 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs57214640 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs58289479 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6415454 | 0.91[EUR][1000 genomes] |
rs6415455 | 0.91[EUR][1000 genomes] |
rs6469323 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6469326 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6469329 | 0.98[EUR][1000 genomes] |
rs6469333 | 0.95[EUR][1000 genomes] |
rs6469334 | 0.95[EUR][1000 genomes] |
rs6469335 | 0.95[EUR][1000 genomes] |
rs6469336 | 0.95[EUR][1000 genomes] |
rs6469337 | 0.91[EUR][1000 genomes] |
rs6469338 | 0.91[EUR][1000 genomes] |
rs6469339 | 0.91[EUR][1000 genomes] |
rs6992712 | 0.95[EUR][1000 genomes] |
rs6996166 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6996467 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7004409 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7004898 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7009162 | 0.95[EUR][1000 genomes] |
rs73325303 | 0.98[EUR][1000 genomes] |
rs73325320 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73325322 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73325323 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73325364 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73325366 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73325385 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73700740 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73700745 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73700751 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73700784 | 0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73702377 | 0.91[EUR][1000 genomes] |
rs7386452 | 0.83[EUR][1000 genomes] |
rs7386585 | 0.95[EUR][1000 genomes] |
rs7387318 | 0.91[EUR][1000 genomes] |
rs7387866 | 0.91[EUR][1000 genomes] |
rs7388561 | 0.80[EUR][1000 genomes] |
rs7388644 | 0.95[EUR][1000 genomes] |
rs7459880 | 0.91[EUR][1000 genomes] |
rs7460049 | 0.91[EUR][1000 genomes] |
rs7461197 | 0.91[EUR][1000 genomes] |
rs7462681 | 0.95[EUR][1000 genomes] |
rs7462742 | 0.95[EUR][1000 genomes] |
rs7463567 | 0.89[EUR][1000 genomes] |
rs7463637 | 0.95[EUR][1000 genomes] |
rs7463960 | 0.93[EUR][1000 genomes] |
rs7465108 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs7819487 | 0.89[EUR][1000 genomes] |
rs7819888 | 0.91[EUR][1000 genomes] |
rs7821277 | 0.91[EUR][1000 genomes] |
rs7826039 | 0.89[EUR][1000 genomes] |
rs7829873 | 0.91[EUR][1000 genomes] |
rs7832532 | 0.80[EUR][1000 genomes] |
rs7845184 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs9297439 | 0.95[EUR][1000 genomes] |
rs931411 | 0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs931412 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9649932 | 0.91[EUR][1000 genomes] |
rs974684 | 0.82[AMR][1000 genomes];0.95[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv891294 | chr8:111754075-112163801 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv1032766 | chr8:111779352-111995438 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
3 | nsv1030494 | chr8:111779352-112421812 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
4 | esv2754849 | chr8:111817591-112088992 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
5 | nsv1033792 | chr8:111824536-111906864 | Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
6 | esv3418448 | chr8:111834718-112112905 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
7 | nsv891295 | chr8:111852200-112163801 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
8 | esv3372961 | chr8:111883825-111909491 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
9 | esv20619 | chr8:111891496-111908496 | Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:111902200-111905800 | Enhancers | Fetal Muscle Leg | muscle |
2 | chr8:111904400-111905600 | Enhancers | Fetal Muscle Trunk | muscle |
3 | chr8:111904600-111906600 | Enhancers | Adipose Nuclei | Adipose |
4 | chr8:111904800-111905600 | Enhancers | HSMMtube | muscle |
5 | chr8:111905200-111905400 | Enhancers | Muscle Satellite Cultured Cells | -- |
6 | chr8:111905200-111905400 | Enhancers | Brain Inferior Temporal Lobe | brain |
7 | chr8:111905200-111905600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
8 | chr8:111905200-111905600 | Enhancers | Brain Angular Gyrus | brain |
9 | chr8:111905200-111905600 | Enhancers | Brain Hippocampus Middle | brain |
10 | chr8:111905200-111905800 | Enhancers | HSMM | muscle |
11 | chr8:111905200-111906800 | Active TSS | Brain Cingulate Gyrus | brain |