Variant report

Variant	rs7853041
Chromosome Location	chr9:13830158-13830159
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs16931031	1.00[EUR][1000 genomes]
rs16931032	1.00[EUR][1000 genomes]
rs16931048	1.00[EUR][1000 genomes]
rs55856986	1.00[EUR][1000 genomes]
rs57635010	1.00[EUR][1000 genomes]
rs57774280	1.00[EUR][1000 genomes]
rs58928986	1.00[EUR][1000 genomes]
rs59195451	1.00[EUR][1000 genomes]
rs59472030	1.00[EUR][1000 genomes]
rs59608060	1.00[EUR][1000 genomes]
rs59642352	1.00[EUR][1000 genomes]
rs60104828	1.00[EUR][1000 genomes]
rs60542509	1.00[EUR][1000 genomes]
rs61333038	1.00[EUR][1000 genomes]
rs61621314	1.00[EUR][1000 genomes]
rs7018527	1.00[EUR][1000 genomes]
rs7035354	1.00[EUR][1000 genomes]
rs7039583	1.00[EUR][1000 genomes]
rs7847104	1.00[EUR][1000 genomes]
rs7855374	1.00[EUR][1000 genomes]
rs7871172	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1033764	chr9:13764918-14226168	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv892592	chr9:13787648-13859052	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13822600-13841400	Weak transcription	Right Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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