The 2.0 version of rSNPBase

Variant report

Variant rs7904189
Chromosome Location chr10:116213678-116213679
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116189200-116231000 Strong transcription Primary T cells from cord blood blood
2 chr10:116189800-116232200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr10:116190200-116218600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr10:116190800-116214200 Strong transcription Primary T helper cells PMA-I stimulated --
5 chr10:116192200-116230600 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr10:116192800-116231000 Strong transcription Primary B cells from peripheral blood blood
7 chr10:116193600-116230800 Weak transcription GM12878-XiMat blood
8 chr10:116194000-116215800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr10:116194400-116251600 Weak transcription Small Intestine intestine
10 chr10:116198600-116214600 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr10:116198800-116214200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr10:116198800-116226000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:116199000-116218000 Weak transcription Brain Cingulate Gyrus brain
14 chr10:116199000-116231000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr10:116199200-116224600 Weak transcription HSMM muscle
16 chr10:116199200-116243400 Weak transcription Brain Hippocampus Middle brain
17 chr10:116199600-116244600 Weak transcription A549 lung
18 chr10:116199800-116249200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr10:116200200-116230800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr10:116200200-116231000 Weak transcription Brain Angular Gyrus brain
21 chr10:116200600-116221800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr10:116200800-116222200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr10:116200800-116224600 Weak transcription Aorta Aorta
24 chr10:116200800-116232400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr10:116201000-116229000 Weak transcription HMEC breast
26 chr10:116201000-116232400 Weak transcription Colonic Mucosa Colon
27 chr10:116201000-116242400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:116201200-116218200 Weak transcription Fetal Brain Male brain
29 chr10:116201800-116216000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr10:116202200-116229000 Weak transcription Fetal Heart heart
31 chr10:116202200-116231600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr10:116202400-116221800 Weak transcription Hela-S3 cervix
33 chr10:116202800-116222000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr10:116204600-116232400 Weak transcription Brain Anterior Caudate brain
35 chr10:116204800-116222000 Weak transcription Thymus Thymus
36 chr10:116205000-116214000 Weak transcription Lung lung
37 chr10:116205000-116222800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr10:116205200-116228400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr10:116205400-116214200 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr10:116205400-116220200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr10:116205400-116223000 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr10:116205600-116218800 Weak transcription Pancreas Pancrea
43 chr10:116205600-116220200 Weak transcription Stomach Smooth Muscle stomach
44 chr10:116205600-116228200 Weak transcription Spleen Spleen
45 chr10:116206600-116232400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr10:116207000-116232800 Weak transcription HUVEC blood vessel
47 chr10:116207400-116217000 Strong transcription HepG2 liver
48 chr10:116208000-116223600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr10:116208200-116221800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr10:116208400-116218800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015