Variant report

Variant	rs7907290
Chromosome Location	chr10:23808646-23808647
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10741030	0.87[EUR][1000 genomes]
rs10828465	0.83[EUR][1000 genomes]
rs10828466	0.83[EUR][1000 genomes]
rs10828467	0.85[EUR][1000 genomes]
rs10828469	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10828470	0.93[EUR][1000 genomes]
rs10828474	0.86[EUR][1000 genomes]
rs10828475	0.85[EUR][1000 genomes]
rs11013531	0.86[EUR][1000 genomes]
rs11013540	0.86[EUR][1000 genomes]
rs11013541	0.87[EUR][1000 genomes]
rs11013543	0.92[EUR][1000 genomes]
rs11013545	0.89[EUR][1000 genomes]
rs11013557	0.85[EUR][1000 genomes]
rs12244668	0.92[EUR][1000 genomes]
rs12254275	0.83[EUR][1000 genomes]
rs12261799	0.84[EUR][1000 genomes]
rs12263327	0.83[EUR][1000 genomes]
rs12266577	0.93[EUR][1000 genomes]
rs12266853	0.83[EUR][1000 genomes]
rs1337324	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1337325	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1415418	0.87[EUR][1000 genomes]
rs1856113	0.93[EUR][1000 genomes]
rs1877325	0.86[EUR][1000 genomes]
rs1877326	0.86[EUR][1000 genomes]
rs1877327	0.86[EUR][1000 genomes]
rs1877328	0.86[EUR][1000 genomes]
rs1984173	0.88[EUR][1000 genomes]
rs1985697	0.93[EUR][1000 genomes]
rs4008949	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4359093	0.86[EUR][1000 genomes]
rs4387257	0.84[EUR][1000 genomes]
rs6482291	0.92[EUR][1000 genomes]
rs6482292	0.92[EUR][1000 genomes]
rs6482293	0.86[EUR][1000 genomes]
rs7071059	0.80[EUR][1000 genomes]
rs7097155	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7899130	0.86[EUR][1000 genomes]
rs7901238	0.83[EUR][1000 genomes]
rs7908703	0.86[EUR][1000 genomes]
rs7908715	0.86[EUR][1000 genomes]
rs7913401	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs983989	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs983990	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831811	chr10:23734326-23913370	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv466835	chr10:23801555-23869175	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
3	nsv550215	chr10:23801555-23869175	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23807000-23810400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr10:23807000-23810400	Weak transcription	Monocytes-CD14+_RO01746	blood

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