Variant report

Variant	rs7924921
Chromosome Location	chr11:76049299-76049300
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76049086..76051481-chr11:76090912..76093072,2	MCF-7	breast:
2	chr11:76030099..76031933-chr11:76048238..76050183,2	K562	blood:

Variant related genes	Relation type
ENSG00000179240	Chromatin interaction
ENSG00000137492	Chromatin interaction

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10736804	0.83[EUR][1000 genomes]
rs10793152	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10793154	0.84[EUR][1000 genomes]
rs10793155	0.85[EUR][1000 genomes]
rs10899209	0.84[EUR][1000 genomes]
rs10899211	0.82[EUR][1000 genomes]
rs4945067	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945068	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4945069	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4945071	0.88[EUR][1000 genomes]
rs4945072	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4945073	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4945074	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4945075	0.85[EUR][1000 genomes]
rs4945076	0.83[AFR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7126625	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7127175	0.80[AFR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76046600-76054600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:76046800-76051400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:76047000-76051400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
4	chr11:76047800-76051200	Enhancers	Primary T cells fromperipheralblood	blood
5	chr11:76047800-76051200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr11:76048000-76051000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr11:76048000-76060000	Weak transcription	Spleen	Spleen
8	chr11:76048000-76061400	Weak transcription	Primary B cells from peripheral blood	blood
9	chr11:76048000-76064800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr11:76048200-76049800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr11:76048200-76050000	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr11:76048200-76051000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr11:76048200-76064000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr11:76048400-76049400	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr11:76048400-76051000	Enhancers	Fetal Thymus	thymus
16	chr11:76048400-76061800	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr11:76048600-76051400	Enhancers	Adipose Nuclei	Adipose
18	chr11:76048600-76051400	Enhancers	Fetal Muscle Leg	muscle
19	chr11:76048600-76059800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr11:76048800-76049800	Enhancers	Right Atrium	heart
21	chr11:76048800-76050000	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr11:76048800-76051200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr11:76049000-76050000	Weak transcription	Thymus	Thymus
24	chr11:76049000-76051200	Enhancers	Colon Smooth Muscle	Colon
25	chr11:76049000-76051400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr11:76049000-76052200	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr11:76049200-76049800	Weak transcription	Osteobl	bone
28	chr11:76049200-76051200	Enhancers	Fetal Muscle Trunk	muscle

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