Variant report

Variant	rs7942606
Chromosome Location	chr11:106690651-106690652
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10160762	0.97[ASN][1000 genomes]
rs10890600	0.97[ASN][1000 genomes]
rs1120250	0.97[ASN][1000 genomes]
rs11211936	0.94[ASN][1000 genomes]
rs12800415	0.92[ASN][1000 genomes]
rs1487891	0.98[ASN][1000 genomes]
rs2200652	0.97[ASN][1000 genomes]
rs2200656	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7107834	0.97[ASN][1000 genomes]
rs7924555	0.98[ASN][1000 genomes]
rs7937534	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556230	chr11:106676942-106704250	Weak transcription Enhancers ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106679200-106692200	Weak transcription	Ovary	ovary
2	chr11:106689600-106699800	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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