Variant report

Variant	rs7953892
Chromosome Location	chr12:103992305-103992306
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10861044	1.00[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10861045	1.00[ASN][1000 genomes]
rs10861046	1.00[ASN][1000 genomes]
rs10861047	1.00[ASN][1000 genomes]
rs10861048	0.99[ASN][1000 genomes]
rs10861049	0.97[ASN][1000 genomes]
rs10861050	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10861051	0.99[ASN][1000 genomes]
rs11111672	0.99[ASN][1000 genomes]
rs11111673	0.99[ASN][1000 genomes]
rs11111674	0.99[ASN][1000 genomes]
rs12303334	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12367313	0.99[ASN][1000 genomes]
rs12832814	0.85[EUR][1000 genomes]
rs1305368	0.98[ASN][1000 genomes]
rs1593806	1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1593810	0.85[EUR][1000 genomes]
rs1593811	0.85[EUR][1000 genomes]
rs1593812	0.91[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes]
rs1593813	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs1610171	1.00[ASN][1000 genomes]
rs1610202	1.00[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs17034119	0.85[EUR][1000 genomes]
rs17034127	0.82[CHB][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17034172	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17034187	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17034225	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2086244	0.99[ASN][1000 genomes]
rs2086245	0.99[ASN][1000 genomes]
rs2086246	0.99[ASN][1000 genomes]
rs2100980	0.99[ASN][1000 genomes]
rs2100981	0.99[ASN][1000 genomes]
rs35929067	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4015364	0.99[ASN][1000 genomes]
rs56402195	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56916543	0.99[ASN][1000 genomes]
rs58261212	0.81[ASN][1000 genomes]
rs6539085	0.97[ASN][1000 genomes]
rs6539091	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap]
rs7134377	1.00[ASN][1000 genomes]
rs7958707	0.81[ASN][1000 genomes]
rs7958798	0.81[ASN][1000 genomes]
rs7958925	0.96[ASN][1000 genomes]
rs7966214	0.99[ASN][1000 genomes]
rs7969320	0.99[ASN][1000 genomes]
rs7979192	0.99[ASN][1000 genomes]
rs7979345	0.99[ASN][1000 genomes]
rs7979507	0.99[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103988400-104000400	Weak transcription	Spleen	Spleen
2	chr12:103991800-103992400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr12:103992200-103992600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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